Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.200 Biomarker disease BEFREE Bioinformatic analysis of the MHC side chains observed to contribute to the peptide anchor specificity, and other specific peptide contacts, reveals HLA alleles associated with long-term nonprogression and a number of related HLA alleles that may share overlapping peptide repertoires with HLA-B*5703 and thus may display a similar capacity for efficient immune control of HIV-1 infection. 16081817 2005
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.200 GeneticVariation disease BEFREE From studies of genetic polymorphisms and the rate of progression from human immunodeficiency virus type 1 (HIV-1) infection to the acquired immunodeficiency syndrome (AIDS), it appears that the strongest susceptibility is conferred by the major-histocompatibility-complex (MHC) class I type HLA-B*35,Cw*04 allele. 11386265 2001
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
0.200 GeneticVariation disease BEFREE Grouping HLA-B locus serologic specificities according to shared structural motifs suggests that different peptide-anchoring pockets may have contrasting influences on the course of HIV-1 infection. 7751163 1995
Entrez Id: 7074
Gene Symbol: TIAM1
TIAM1
0.110 GeneticVariation disease GWASCAT Genome-wide association study of virologic response with efavirenz-containing or abacavir-containing regimens in AIDS clinical trials group protocols. 25461247 2015
Entrez Id: 7074
Gene Symbol: TIAM1
TIAM1
0.110 Biomarker disease BEFREE Env-mediated cell-cell fusion, virus-cell fusion and HIV-1 infection are dependent on Tiam-1, Abl, IRSp53, Wave2, and Arp3 as shown by attenuation of fusion and infection in cells expressing siRNA targeted to these signaling components. 20585556 2010
Entrez Id: 25939
Gene Symbol: SAMHD1
SAMHD1
0.100 Biomarker disease BEFREE To investigate the contribution of SAMHD1 to HIV-1 infection in vivo and its relationship with IFN response, the expression of SAMHD1 and IFN-related pathways was evaluated in HIV-1-infected patients. 30564919 2019
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.100 Biomarker disease BEFREE <b>Conclusions:</b> The impaired ability of activated CD56<sup>+</sup> T cells to secreting IL-2 might contribute to the attenuated NK cell-mediated ADCC function in HIV-1 infection. 31379845 2019
Entrez Id: 11261
Gene Symbol: CHP1
CHP1
0.100 Biomarker disease BEFREE Compared with baseline, p24 antigen production after <i>ex vivo</i> HIV-1 infection of vaginal biopsies doubled after DMPA use, but all <i>p</i>-values were >.05. 30997816 2019
Entrez Id: 11076
Gene Symbol: TPPP
TPPP
0.100 AlteredExpression disease BEFREE Inhibitory activity of peptides on 6HB formation was tested in a temperature-controlled cell-cell fusion assay by flow cytometry using 6HB-specific mAb 2G8; on HIV-1 infection and fusion was assessed by p24 and cell-cell fusion assays. 30932963 2019
Entrez Id: 10959
Gene Symbol: TMED2
TMED2
0.100 Biomarker disease BEFREE We demonstrate that ddPCR is a suitable alternative to HIV-1 p24 ELISA to quantify HIV-1 infection in the explant model and has the potential to decrease explant culture time. 30618283 2019
Entrez Id: 115482709
Gene Symbol: H3P19
H3P19
0.100 Biomarker disease BEFREE Compared with baseline, p24 antigen production after <i>ex vivo</i> HIV-1 infection of vaginal biopsies doubled after DMPA use, but all <i>p</i>-values were >.05. 30997816 2019
Entrez Id: 11076
Gene Symbol: TPPP
TPPP
0.100 Biomarker disease BEFREE We demonstrate that ddPCR is a suitable alternative to HIV-1 p24 ELISA to quantify HIV-1 infection in the explant model and has the potential to decrease explant culture time. 30618283 2019
Entrez Id: 100616444
Gene Symbol: ERVK-20
ERVK-20
0.100 Biomarker disease BEFREE An efficient and specific liquid chromatography (LC)-based assay was developed to monitor the production of recombinant HIV-1 trimeric envelope glycoprotein (HIV Env trimer), a candidate vaccine for HIV-1 infection, in cell culture media to support scale-up process development. 31060952 2019
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.100 Biomarker disease BEFREE Targeting CCR5 trafficking to inhibit HIV-1 infection. 31663020 2019
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.100 AlteredExpression disease BEFREE Disruption of CCR5 expression by lentiviral vector-mediated CRISPR/SaCas9 led to increased resistance against HIV-1 infection in human primary CD4<sup>+</sup> T cells. 31186067 2019
Entrez Id: 6898
Gene Symbol: TAT
TAT
0.100 Biomarker disease BEFREE NRON mediates the degradation of tat protein to participate in HIV-1 infection. 30996114 2019
Entrez Id: 10959
Gene Symbol: TMED2
TMED2
0.100 Biomarker disease BEFREE Compared with baseline, p24 antigen production after <i>ex vivo</i> HIV-1 infection of vaginal biopsies doubled after DMPA use, but all <i>p</i>-values were >.05. 30997816 2019
Entrez Id: 30816
Gene Symbol: ERVW-1
ERVW-1
0.100 Biomarker disease BEFREE An efficient and specific liquid chromatography (LC)-based assay was developed to monitor the production of recombinant HIV-1 trimeric envelope glycoprotein (HIV Env trimer), a candidate vaccine for HIV-1 infection, in cell culture media to support scale-up process development. 31060952 2019
Entrez Id: 140767
Gene Symbol: NRSN1
NRSN1
0.100 AlteredExpression disease BEFREE Inhibitory activity of peptides on 6HB formation was tested in a temperature-controlled cell-cell fusion assay by flow cytometry using 6HB-specific mAb 2G8; on HIV-1 infection and fusion was assessed by p24 and cell-cell fusion assays. 30932963 2019
Entrez Id: 100616444
Gene Symbol: ERVK-20
ERVK-20
0.100 Biomarker disease BEFREE Viral entry, which involves the interaction of the surface envelope glycoprotein, gp120, with the cellular receptor, CD4, is the first step of HIV-1 infection. 31424369 2019
Entrez Id: 11261
Gene Symbol: CHP1
CHP1
0.100 AlteredExpression disease BEFREE Inhibitory activity of peptides on 6HB formation was tested in a temperature-controlled cell-cell fusion assay by flow cytometry using 6HB-specific mAb 2G8; on HIV-1 infection and fusion was assessed by p24 and cell-cell fusion assays. 30932963 2019
Entrez Id: 30816
Gene Symbol: ERVW-1
ERVW-1
0.100 Biomarker disease BEFREE Broadly neutralizing antibodies (bNAbs) targeting the HIV-1 envelope glycoprotein (Env) have promising utility in prevention and treatment of HIV-1 infection, and several are currently undergoing clinical trials. 31604961 2019
Entrez Id: 11261
Gene Symbol: CHP1
CHP1
0.100 Biomarker disease BEFREE We demonstrate that ddPCR is a suitable alternative to HIV-1 p24 ELISA to quantify HIV-1 infection in the explant model and has the potential to decrease explant culture time. 30618283 2019
Entrez Id: 7852
Gene Symbol: CXCR4
CXCR4
0.100 Biomarker disease BEFREE The chemokine receptor CXCR4/stromal cell-derived factor-1 (SDF-1: CXCL12) signaling axis represents a crucial drug target due to its relevance to several diseases such as HIV-1 infection, cancer, leukemia, and rheumatoid arthritis. 30772128 2019
Entrez Id: 1234
Gene Symbol: CCR5
CCR5
0.100 GeneticVariation disease BEFREE Recently, a second individual (the "London patient") with HIV-1 infection and concomitant leukemia was cured of both diseases by a conditioning myeloablative regimen followed by transplantation of stem cells bearing the homozygous CCR5 Δ32 mutation. 31636630 2019