Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 791121
Gene Symbol: SHFL1
SHFL1
0.030 Biomarker disease BEFREE Split-hand/foot malformation (SHFM) with long-bone deficiency (SHFLD, MIM#119100) is a rare condition characterised by SHFM associated with long-bone malformation usually involving the tibia. 23202277 2013
Entrez Id: 791121
Gene Symbol: SHFL1
SHFL1
0.030 Biomarker disease BEFREE Split hand/foot malformation (SHFM) with long-bone deficiency (SHFLD, MIM#119100) is a rare condition characterized by SHFM associated with long-bone malformation usually involving the tibia. 23790188 2014
Entrez Id: 7480
Gene Symbol: WNT10B
WNT10B
0.090 GeneticVariation disease BEFREE Split hand-foot malformation and a novel WNT10B mutation. 29427788 2018
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 GeneticVariation disease BEFREE Split-hand/foot malformation (SHFM) is caused by mutations in TP63, DLX5, DLX6, FGF8, FGFR1, WNT10B, and BHLHA9. 30101460 2019
Entrez Id: 727857
Gene Symbol: BHLHA9
BHLHA9
0.090 GeneticVariation disease BEFREE Split-hand/foot malformation (SHFM) is caused by mutations in TP63, DLX5, DLX6, FGF8, FGFR1, WNT10B, and BHLHA9. 30101460 2019
Entrez Id: 8724
Gene Symbol: SNX3
SNX3
0.010 GeneticVariation disease BEFREE Sorting nexin 3 (SNX3) is disrupted in a patient with a translocation t(6;13)(q21;q12) and microcephaly, microphthalmia, ectrodactyly, prognathism (MMEP) phenotype. 12471201 2002
Entrez Id: 1913
Gene Symbol: EEC1
EEC1
0.080 Biomarker disease BEFREE EEC (ectrodactyly, ectodermal dysplasia, clefting; OMIM 604292) is an autosomal dominant developmental disorder resulting mainly from pathogenic mutations of the DNA-binding domain (DBD) of the TP63 gene. 22574117 2012
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.030 GeneticVariation disease BEFREE FGFR1 mutations cause Hartsfield syndrome, the unique association of holoprosencephaly and ectrodactyly. 23812909 2013
Entrez Id: 7979
Gene Symbol: SEM1
SEM1
0.080 Biomarker disease BEFREE SHFM1, which is one out of seven known SHFM loci, maps to 7q21.2-q21.3. 25196357 2014
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.030 Biomarker disease BEFREE FGFR1 Analyses in Four Patients with Hypogonadotropic Hypogonadism with Split-Hand/Foot Malformation: Implications for the Promoter Region. 28087897 2017
Entrez Id: 7480
Gene Symbol: WNT10B
WNT10B
0.090 GeneticVariation disease BEFREE WNT10B variants in split hand/foot malformation: Report of three novel families and review of the literature. 31050392 2019
Entrez Id: 7480
Gene Symbol: WNT10B
WNT10B
0.090 GeneticVariation disease BEFREE A classification system for split-hand/ foot malformation (SHFM): A proposal based on 3 pedigrees with WNT10B mutations. 31421290 2020
Entrez Id: 791121
Gene Symbol: SHFL1
SHFL1
0.030 Biomarker disease BEFREE A distinct entity termed SHFLD presents with SHFM and long bone deficiency. 22147889 2012
Entrez Id: 1913
Gene Symbol: EEC1
EEC1
0.080 GeneticVariation disease BEFREE A male child with clinical features consistent with EEC/EECUT plus syndrome (ectrodactyly, ectodermal dysplasia, clefting, urinary tract abnormalities, and thymic abnormalities) including mild ectodermal abnormalities, ectrodactyly of hands and feet, cleft palate, bilateral hydronephrosis, and T cell lymphopenia is reported. 23613309 2013
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 GeneticVariation disease BEFREE A novel H208D TP63 mutation in a familial case of ectrodactyly-ectodermal dysplasia-cleft lip/palate syndrome without clefting. 19663851 2009
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 GeneticVariation disease BEFREE A novel mutation (c.1010G>T; p.R337L) in TP63 as a cause of split-hand/foot malformation with hypodontia. 31420900 2019
Entrez Id: 7329
Gene Symbol: UBE2I
UBE2I
0.010 GeneticVariation disease BEFREE A p63alpha mutation, Q634X, which naturally occurs in SHFM modulated the interaction of p63alpha with Ubc9 in yeast genetic assay. 15539951 2004
Entrez Id: 6468
Gene Symbol: FBXW4
FBXW4
0.020 Biomarker disease BEFREE A potential haplotype in the SHFM3 locus was shared by all affected individuals. qPCR and inverse PCR showed a microduplication at chromosome 10q24 spanning 488,859 bp and encompassing five entire genes, LBX1, BTRC, POLL, DPCD, and FBXW4, that co-segregated with the SHFM phenotype. 28422522 2017
Entrez Id: 3730
Gene Symbol: ANOS1
ANOS1
0.010 AlteredExpression disease BEFREE Additionally, a literature review allowed us to conclude that KAL1 protein at high levels may interfere with FGFR1 signaling activity, most probably indirectly giving rise to ectrodactyly, intellectual disability, and genital anomalies. 25339597 2015
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 Biomarker disease BEFREE ADULT syndrome is much less common than the more classical forms of TP63-associated ectodermal dysplasias, such as ectrodactyly-ectodermal dysplasia-cleft lip/palate (EEC) syndrome and ankyloblepharon-ectodermal defects-cleft lip/palate syndrome. 22607287 2012
Entrez Id: 7979
Gene Symbol: SEM1
SEM1
0.080 GeneticVariation disease BEFREE Although six different loci/mutations (SHFM1-6) have been associated with SHFM, the underlying cause in a large number of cases is still unresolved. 22147889 2012
Entrez Id: 7979
Gene Symbol: SEM1
SEM1
0.080 GeneticVariation disease BEFREE Although six different loci/mutations (SHFM1-SHFM6) have been found from studies on families with SHFM, the causes and associated pathogenic mechanisms for a large number of patients remain unidentified. 28324176 2018
Entrez Id: 7480
Gene Symbol: WNT10B
WNT10B
0.090 GeneticVariation disease BEFREE Although six different loci/mutations (SHFM1-SHFM6) have been found from studies on families with SHFM, the causes and associated pathogenic mechanisms for a large number of patients remain unidentified. 28324176 2018
Entrez Id: 727857
Gene Symbol: BHLHA9
BHLHA9
0.090 GeneticVariation disease BEFREE Although the BHLHA9 copy gain is known to be associated with split-hand-foot malformation, the penetrance and expressivity is highly variable. 24380768 2014
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 GeneticVariation disease BEFREE Anorectal malformation associated with a mutation in the P63 gene in a family with split hand-foot malformation. 23736768 2013