Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2002
Gene Symbol: ELK1
ELK1
0.010 GeneticVariation disease BEFREE About 30% of the mutations causing nonsyndromic X-linked mental retardation (MRX) are thought to be located in Xp11 and in the pericentromeric region, with a particular clustering of gene defects in a 7.4 Mb interval flanked by the genes ELK1 and ALAS2. 16969374 2007
Entrez Id: 212
Gene Symbol: ALAS2
ALAS2
0.010 GeneticVariation disease BEFREE About 30% of the mutations causing nonsyndromic X-linked mental retardation (MRX) are thought to be located in Xp11 and in the pericentromeric region, with a particular clustering of gene defects in a 7.4 Mb interval flanked by the genes ELK1 and ALAS2. 16969374 2007
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.010 GeneticVariation disease BEFREE This finding is in agreement with the hypothesis that the incidence of intermediate FMR1 alleles in MRX populations does not seem to be higher than in control populations, and it emphasizes the importance of FMRP detection as a diagnostic tool for fragile X syndrome. 11030419 2000
Entrez Id: 5456
Gene Symbol: POU3F4
POU3F4
0.010 GeneticVariation disease BEFREE RSK4 is completely deleted in eight patients with the contiguous gene syndrome including MRX, partially deleted in a patient with DFN3 and present in patients with an Xq21 deletion and normal intellectual abilities. 10644430 1999
Entrez Id: 27330
Gene Symbol: RPS6KA6
RPS6KA6
0.010 Biomarker disease BEFREE RSK4 is completely deleted in eight patients with the contiguous gene syndrome including MRX, partially deleted in a patient with DFN3 and present in patients with an Xq21 deletion and normal intellectual abilities. 10644430 1999
Entrez Id: 3730
Gene Symbol: ANOS1
ANOS1
0.010 GeneticVariation disease BEFREE DNA investigation established an interstitial deletion in Xp22.3 involving the Kallmann (KAL) gene, the steroid sulfatase (STS) gene and a putative mental retardation locus (MRX). 9727739 1998
Entrez Id: 5267
Gene Symbol: SERPINA4
SERPINA4
0.010 GeneticVariation disease BEFREE DNA investigation established an interstitial deletion in Xp22.3 involving the Kallmann (KAL) gene, the steroid sulfatase (STS) gene and a putative mental retardation locus (MRX). 9727739 1998
Entrez Id: 57187
Gene Symbol: THOC2
THOC2
0.010 Biomarker disease BEFREE Although an extension of the linkage analysis for MRX35 showed only a minimal overlap with MRX46, it cannot be excluded that the same gene is involved in several of these MRX disorders. 9783701 1998
Entrez Id: 4983
Gene Symbol: OPHN1
OPHN1
0.020 GeneticVariation disease BEFREE Mutations of oligophrenin 1, one of the first genes identified in nonspecific X-linked mental retardation (MRX), have been described in patients with moderate to severe cognitive impairment and predominant cerebellar hypoplasia, in the vermis. 16221952 2005
Entrez Id: 4983
Gene Symbol: OPHN1
OPHN1
0.020 GeneticVariation disease BEFREE We have recently shown that mutations in oligophrenin-1 (OPHN1) are responsible for non-specific X-linked mental retardation (MRX). 10818214 2000
Entrez Id: 412
Gene Symbol: STS
STS
0.020 GeneticVariation disease BEFREE DNA investigation established an interstitial deletion in Xp22.3 involving the Kallmann (KAL) gene, the steroid sulfatase (STS) gene and a putative mental retardation locus (MRX). 9727739 1998
Entrez Id: 412
Gene Symbol: STS
STS
0.020 GeneticVariation disease BEFREE Although genotype-phenotype correlations in male patients with various types of nullisomy for Xp22.3 have assigned a locus for X-linked mental retardation (MRX) to an approximately 3-Mb region between DXS31 and STS, the precise location has not been determined. 8870926 1996
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 GeneticVariation disease BEFREE Mutations in most of more than 20 known genes causing nonspecific form of X-linked MR (MRX) are very rare and may account for less than 0.5-1% of MR. Linkage studies in extended pedigrees followed by mutational analysis of known MRX genes in the linked interval are often the only way to identify a genetic cause of the disorder. 19012350 2008
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 GeneticVariation disease BEFREE The 13 MRX genes identified to date account for less than one-fifth of all MRX, suggesting that numerous gene defects cause the disorder in other families. 14628291 2003
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.030 Biomarker disease BEFREE These findings, with the compelling genetic evidence suggesting the presence in Xq28 of additional genes besides RabGDI1 and FMR2 involved in non-specific X-linked mental retardation (MRX), prompted us to investigate MECP2 in MRX families. 11309367 2001
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.030 Biomarker disease BEFREE Elucidation of the function of the FMR2 protein as a transcription activator may place FMR2 within the molecular signalling pathways involved in nonspecific X-linked mental retardation (MRX). 11355014 2001
Entrez Id: 2334
Gene Symbol: AFF2
AFF2
0.030 Biomarker disease BEFREE These findings, with the compelling genetic evidence suggesting the presence in Xq28 of additional genes besides RabGDI1 and FMR2 involved in non-specific X-linked mental retardation (MRX), prompted us to investigate MECP2 in MRX families. 11309367 2001
Entrez Id: 2334
Gene Symbol: AFF2
AFF2
0.030 Biomarker disease BEFREE Elucidation of the function of the FMR2 protein as a transcription activator may place FMR2 within the molecular signalling pathways involved in nonspecific X-linked mental retardation (MRX). 11355014 2001
Entrez Id: 2481
Gene Symbol: FRAXE
FRAXE
0.030 Biomarker disease BEFREE So far, seven X-chromosomal genes mutated in nonspecific mental retardation (MRX) have been identified: FMR2, GDI1, RPS6KA3, IL1RAPL, TM4SF2, OPHN1 and PAK3 (refs 2-9). 11017088 2000
Entrez Id: 2334
Gene Symbol: AFF2
AFF2
0.030 Biomarker disease BEFREE So far, seven X-chromosomal genes mutated in nonspecific mental retardation (MRX) have been identified: FMR2, GDI1, RPS6KA3, IL1RAPL, TM4SF2, OPHN1 and PAK3 (refs 2-9). 11017088 2000
Entrez Id: 9429
Gene Symbol: ABCG2
ABCG2
0.030 GeneticVariation disease BEFREE On the other hand, given the considerable genetic heterogeneity in MRX, one should be extremely cautious in using interfamilial linkage data to narrow down the localisation of MRX genes. 9783701 1998
Entrez Id: 84679
Gene Symbol: SLC9A7
SLC9A7
0.300 GermlineCausalMutation disease ORPHANET A recurrent missense variant in SLC9A7 causes nonsyndromic X-linked intellectual disability with alteration of Golgi acidification and aberrant glycosylation. 30335141 2019
Entrez Id: 63932
Gene Symbol: CXorf56
CXorf56
0.300 GermlineCausalMutation disease ORPHANET CXorf56, a dendritic neuronal protein, identified as a new candidate gene for X-linked intellectual disability. 29374277 2018
Entrez Id: 1183
Gene Symbol: CLCN4
CLCN4
0.300 GermlineCausalMutation disease ORPHANET X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes. 25644381 2016
Entrez Id: 22866
Gene Symbol: CNKSR2
CNKSR2
0.300 GermlineCausalMutation disease ORPHANET X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes. 25644381 2016