Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.800 PosttranslationalModification group BEFREE The methylation profile of the GATA2 promoter region was different between the twins, showing denser promoter methylation in the patient, correlated with MDS. 30714451 2019
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.800 GeneticVariation group BEFREE Two myeloid neoplasms defined by the presence of RS, include refractory anemia with ring sideroblasts (RARS), now classified under myelodysplastic syndromes with RS (MDS-RS) and RARS with thrombocytosis (RARS-T); now called myelodysplastic/myeloproliferative neoplasm with RS and thrombocytosis (MDS/MPN-RS-T). 30618061 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE Mutations of <i>SF3B1</i> are commonly seen in myelodysplastic syndromes with ring sideroblasts (MDS-RS)and MDS/myeloproliferative neoplasm (MPN-RS-T). 31473630 2019
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.800 AlteredExpression group BEFREE Loss and gain of GATA2 expression has been implicated in myelodysplastic syndrome and acute myeloid leukemia (AML) yet the precise biological impact of GATA2 expression on human AML cell fate decisions remains ambiguous. 31434974 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE In the phase III MDS-005 study of patients with lower-risk, non-del(5q) myelodysplastic syndromes, lenalidomide was associated with a higher rate of ≥ 8 weeks red blood cell transfusion independence (RBC-TI) compared with placebo, but also with a higher risk of hematologic adverse events (AEs). 30770308 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.800 GeneticVariation group BEFREE An epigenetic modulator Additional sex combs-like 1 (ASXL1) is recurrently mutated in myeloid neoplasms such as myelodysplastic syndromes (MDS), acute myeloid leukemia (AML) and myeloproliferative neoplasms (MPNs). 30515738 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE The spliceosomal component Splicing Factor 3B, subunit 1 (SF3B1) is one of the most prevalently mutated factors in the bone marrow failure disorder myelodysplastic syndrome. 31300417 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE Thus, the current meta-analysis suggests that SF3B1 mutations have no significant impact on the OS of MDS patients, and the hematologic parameters of SF3B1 mutations identify a distinct subset of MDS patients with homogeneous features. 30661660 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.800 GeneticVariation group BEFREE Two myeloid neoplasms defined by the presence of RS, include refractory anemia with ring sideroblasts (RARS), now classified under myelodysplastic syndromes with RS (MDS-RS) and RARS with thrombocytosis (RARS-T); now called myelodysplastic/myeloproliferative neoplasm with RS and thrombocytosis (MDS/MPN-RS-T). 30618061 2019
Entrez Id: 7307
Gene Symbol: U2AF1
U2AF1
0.800 GeneticVariation group BEFREE U2 small nuclear RNA auxiliary factor 1 (U2AF1) mutant is the most common molecular biological abnormality in patients with myelodysplastic syndromes. 31754743 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.800 GeneticVariation group BEFREE Mutations of <i>SF3B1</i> are commonly seen in myelodysplastic syndromes with ring sideroblasts (MDS-RS)and MDS/myeloproliferative neoplasm (MPN-RS-T). 31473630 2019
Entrez Id: 7307
Gene Symbol: U2AF1
U2AF1
0.800 AlteredExpression group BEFREE Collectively, mutations in U2AF1 induce expression of therapeutically targetable 'active' IRAK4 isoforms and provide a genetic link to activation of chronic innate immune signalling in MDS and AML. 31011167 2019
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.800 GeneticVariation group BEFREE TET2 rs2454206 G/A genotype was associated with higher serum LDH level in MDS (P = 0.025). 30454965 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.800 Biomarker group BEFREE In this study, we assessed the role of p53 in MDS and AML cells treated with decitabine using mouse models for MLL-AF9-driven AML and mutant ASXL1-driven MDS/AML. 31160638 2019
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.800 Biomarker group BEFREE Metformin, a widely used antidiabetic drug, has previously been demonstrated to exert anti-cancer effects in certain hematological malignancies, but its effects on the transformation of myelodysplastic syndromes to acute myeloid leukemia (AML-MDS) remain unclear. 31744691 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE We found that there was a significant difference between SF3B1-mutant and SF3B1-wild-type MDS patients in intracellular iron III, intracellular iron IV and ring sideroblasts. 30409066 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE Splicing factor 3b subunit 1 (<i>SF3B1</i>), a splicing factor modulating RNA alternative splicing, is frequently mutated in multiple hematological malignancies including myelodysplastic syndromes and chronic lymphocytic leukemia (CLL). 31168457 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE Two myeloid neoplasms defined by the presence of RS, include refractory anemia with ring sideroblasts (RARS), now classified under myelodysplastic syndromes with RS (MDS-RS) and RARS with thrombocytosis (RARS-T); now called myelodysplastic/myeloproliferative neoplasm with RS and thrombocytosis (MDS/MPN-RS-T). 30618061 2019
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.800 GeneticVariation group BEFREE A case study is presented of a 33-year-old man with recurrent infections and MDS and his two sons, all of whom were found to have the same GATA2 mutation. 31322613 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE To better understand how spliceosomal mutations contribute to MDS pathogenesis in vivo, numerous groups have sought to establish conditional murine models of SF3B1, SRSF2, and U2AF1 mutations. 30408513 2019
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.800 GeneticVariation group BEFREE The GATA2 protein has been shown to be vital for proliferation and maintenance of hematopoietic stem cells; mutations result in variable phenotypes including myelodysplastic syndrome. 30933029 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 GeneticVariation group BEFREE NGS can be used for various applications: (i) in the diagnostic process to discriminate between MDS and other diseases such as aplastic anaemia, myeloproliferative disorders and idiopathic cytopenias; (ii) for classification, for example, where the presence of SF3B1 mutation is one criterion for the ring sideroblast anaemia subgroups in the World Health Organization 2016 classification; (iii) for identification of patients suitable for targeted therapy (e.g. 30869816 2019
Entrez Id: 23451
Gene Symbol: SF3B1
SF3B1
0.800 Biomarker group BEFREE 5-Formylcytosine and 5-hydroxymethyluracil as surrogate markers of TET2 and SF3B1 mutations in myelodysplastic syndrome, respectively. 31488558 2019
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.800 GeneticVariation group BEFREE TET2 rs2454206, TET2 rs12498609 and ASXL1 rs3746609 single nucleotide polymorphisms in patients with myelodysplastic syndromes. 30454965 2019
Entrez Id: 2624
Gene Symbol: GATA2
GATA2
0.800 GeneticVariation group BEFREE We describe the case of a 17-year-old male presenting with features of nontuberculous mycobacterial infection, pulmonary fibrinoid granulomatous vasculitis, and myelodysplasia in the setting of a pathogenic GATA2 frameshift mutation confirmed by next-generation sequencing. 31033783 2019