Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 472
Gene Symbol: ATM
ATM
0.100 Biomarker disease BEFREE Analyses of ATM serine 1981 and Chk1 serine 345 phosphorylation, and FANCD2 monoubiquitination revealed that ATM and ATR kinase activation and FA pathway signaling are intact in the lung cancer cell lines examined. 26438152 2015
Entrez Id: 472
Gene Symbol: ATM
ATM
0.100 Biomarker disease BEFREE Pharmaceutical inhibition of ATM may have a role in the treatment of FA pathway-deficient human cancers. 17431503 2007
Entrez Id: 472
Gene Symbol: ATM
ATM
0.100 Biomarker disease BEFREE Analysis of publicly available gene expression data showed that exposure of HR-proficient breast cancer cell lines to HSP90i 17-AAG(17-allylamino-17-demethoxygeldanamycin) downregulated HR, ATM and Fanconi Anemia pathways. 24798692 2014
Entrez Id: 472
Gene Symbol: ATM
ATM
0.100 Biomarker disease BEFREE Mutations in BRCA genes cannot account for all cases of HBOC, indicating that the remaining cases can be attributed to the involvement of constitutive epimutations or other cancer susceptibility genes, which include Fanconi anemia (FA) cluster (FANCD2, FANCA and FANCC), mismatch repair (MMR) cluster (MLH1, MSH2, PMS1, PMS2 and MSH6), DNA repair cluster (ATM, ATR and CHK1/2), and tumor suppressor cluster (TP53, SKT11 and PTEN). 23779253 2013
Entrez Id: 472
Gene Symbol: ATM
ATM
0.100 AlteredExpression disease BEFREE Upregulated ATM gene expression and activated DNA crosslink-induced damage response checkpoint in Fanconi anemia: implications for carcinogenesis. 18224251 2008
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 PosttranslationalModification disease BEFREE Monoubiquitination or ATR-dependent phosphorylation of FANCI were not required for the FA core complex recruitment, but FANCI deubiquitination by USP1 was. 26430909 2015
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE Overall, our data suggest that an ATR-FANCM feedback loop is present in the FA and replication stress response pathways and that it is required for both efficient ATR/CHK1 checkpoint activation and FANCM function. 23698467 2013
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE Moreover, we find that the DNA translocase activity of FANCM, which is dispensable for FA pathway activation, is required for its role in ATR/Chk1 signaling. 18995830 2008
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE Analyses of ATM serine 1981 and Chk1 serine 345 phosphorylation, and FANCD2 monoubiquitination revealed that ATM and ATR kinase activation and FA pathway signaling are intact in the lung cancer cell lines examined. 26438152 2015
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE Mutations in BRCA genes cannot account for all cases of HBOC, indicating that the remaining cases can be attributed to the involvement of constitutive epimutations or other cancer susceptibility genes, which include Fanconi anemia (FA) cluster (FANCD2, FANCA and FANCC), mismatch repair (MMR) cluster (MLH1, MSH2, PMS1, PMS2 and MSH6), DNA repair cluster (ATM, ATR and CHK1/2), and tumor suppressor cluster (TP53, SKT11 and PTEN). 23779253 2013
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE The proteins involved in FA act coordinately in the cellular response to DNA cross-links in a pathway that has been shown to interact physically or functionally with a variety of other proteins involved in DNA repair or cell cycle control, notably BRCA1, Rad51,ATM,ATR, and Nbs1. 16207587 2005
Entrez Id: 545
Gene Symbol: ATR
ATR
0.070 Biomarker disease BEFREE Therefore, the ATR- and BRCA1-mediated FA pathway is required for the activation of a G2/M checkpoint and for DNA damage repair in response to the endogenous signal of rereplication. 16738325 2006
Entrez Id: 546
Gene Symbol: ATRX
ATRX
0.010 Biomarker disease BEFREE Gene variants in the DNA helicase RECQL4 (n = 2) and components of the Fanconi anemia complementation group (FANCD2, FANCF, FANCG) (n = 1) were identified in two alternative lenghtening of telomere-positive/ATRX-intact cases. 29973652 2018
Entrez Id: 6310
Gene Symbol: ATXN1
ATXN1
0.010 Biomarker disease BEFREE In addition, we observed for the first time in a FA mouse model a marked in vitro growth defect of Fanca(-/-) progenitors, either when total BM or when purified Lin(-)Sca-1(+) cells were subjected to in vitro stimulation. 12200363 2002
Entrez Id: 29086
Gene Symbol: BABAM1
BABAM1
0.010 Biomarker disease BEFREE These findings implicate MERIT40 in the earliest stages of ICL repair and define specific functional interactions between RAP80 complex-dependent ubiquitin recognition and the Fanconi anemia (FA)-BRCA ICL repair network. 26338419 2015
Entrez Id: 571
Gene Symbol: BACH1
BACH1
0.030 Biomarker disease BEFREE Fanconi anemia (FA) results from mutations in a group of genes whose products, including BRCA2 and BACH1/BRIP1, are known to function in one common pathway (the FA-BRCA pathway) to guard genome integrity, especially when challenged by DNA crosslinking agents, such as Cisplatin and mitomycin C (MMC). 17106252 2006
Entrez Id: 571
Gene Symbol: BACH1
BACH1
0.030 Biomarker disease BEFREE One of the more recently identified FA proteins, shown to be responsible for complementation of the FA complementation group J, is the BRCA1 Associated C-terminal Helicase (BACH1, designated FANCJ), originally identified as a protein associated with breast cancer. 19519404 2009
Entrez Id: 571
Gene Symbol: BACH1
BACH1
0.030 Biomarker disease BEFREE Expression of wild-type BACH1 in this cell line reduced the accumulation of cells at G2/M phases following exposure to DNA crosslinkers, a characteristic of Fanconi anemia (FA) cells. 16153896 2005
Entrez Id: 581
Gene Symbol: BAX
BAX
0.010 AlteredExpression disease BEFREE Furthermore, FA treatment has shown mitigation in intracerebral-ventricular streptozocin (ICV-STZ) induced bioenergetics loss and dynamic changes by regulating peroxisome proliferator-activated receptor gamma coactivator 1-alpha (PGC-1alpha) protein levels in nucleus and hence, mitigating exacerbation of Drp-1 dependent mitochondrial fission and apoptosis by alleviating loss of mitochondrial membrane potential (ΔΨm), downregulating cytochrome-c release into the cytosol by limiting mitochondrial permeability transition pore (mPTP) opening concomitant increase in caspase3 activation, BAX expression and DNA fragmentation along with downregulating glial fibrillary acidic protein (GFAP) expression. 31029786 2019
Entrez Id: 83596
Gene Symbol: BCL2L12
BCL2L12
0.010 Biomarker disease BEFREE In this study, peripheral CD4<sup>+</sup> T cells were isolated from food allergy (FA) patients and healthy subjects; A mouse FA model was developed to test the role of Bcl2L12 in induction of allergic response in the intestine. 30194965 2018
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.010 Biomarker disease BEFREE Consequently, dysfunction of vertebrate POZ-ZF proteins, such as promyelocytic leukemia zinc finger (PLZF), B cell lymphoma 6 (Bcl-6), hypermethylated in cancer 1 (HIC-1), Kaiso, ZBTB7 and Fanconi anemia zinc finger (FAZF), has been linked directly or indirectly to tumorigenesis and developmental disorders. 16996269 2006
Entrez Id: 613
Gene Symbol: BCR
BCR
0.010 GeneticVariation disease BEFREE Monoubiquitinated Fanconi anemia D2 (FANCD2-Ub) is required for BCR-ABL1 kinase-induced leukemogenesis. 21519342 2011
Entrez Id: 641
Gene Symbol: BLM
BLM
0.090 GeneticVariation disease BEFREE BS and FA group J arise from mutations in the BLM and FANCJ genes, respectively, which encode DNA helicases. 21240188 2011
Entrez Id: 641
Gene Symbol: BLM
BLM
0.090 Biomarker disease BEFREE RUNX Poly(ADP-Ribosyl)ation and BLM Interaction Facilitate the Fanconi Anemia Pathway of DNA Repair. 30110632 2018
Entrez Id: 641
Gene Symbol: BLM
BLM
0.090 AlteredExpression disease BEFREE Here we report that BLM is involved in the early activation of FA group D2 protein (FANCD2). 27083049 2016