Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE The HLA-DPB1*0401 allele, the PI*Z allele of the gene encoding α1-antitrypsin (SERPINA1) and the proteinase 3 (PRTN3) gene have been associated with GPA. 25172939 2015
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Among six patients without granuloma on nasal biopsy, three patients with only antineutrophil cytoplasmic antibody (ANCA) and chronic rhinosinusitis could be classified as GPA due to proteinase 3 (PR3)-ANCA (or cytoplasmic (C)-ANCA) positivity. 30887162 2019
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Proteinase 3 (PR3), the target antigen of antineutrophil cytoplasm autoantibodies, which are found in patients with Wegener granulomatosis, is a neutrophil serine protease localized within cytoplasmic granules. 18854317 2008
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Granuloma formation, as seen in PR3-ANCA-associated GPA, is not well explained by the presence of autoantibodies in experimental models.Here, T cells seem crucial. 23810690 2013
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Among antineutrophil cytoplasmic antibody (ANCA)-associated vasculitides (AAV), granulomatosis with polyangiitis (GPA) and proteinase 3-ANCA-positive AAV (PR3-AAV) are prevalent in European populations, while microscopic polyangiitis (MPA) and myeloperoxidase-ANCA-positive AAV (MPO-AAV) are predominant in the Japanese. 27166610 2016
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE All but one patient, who had concomitant C-ANCA seropositivity and granulomatosis with polyangiitis, had a favorable disease course with controlled inflammation using topical and/or systemic immunomodulatory therapy. 30230931 2019
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE This study excludes certain PR3 epitope variants as autoantigenic stimuli in WG, since the Val119Ile polymorphism showed no differences between patients and controls. 11115080 2000
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Association of ETS1 polymorphism with granulomatosis with polyangiitis and proteinase 3-anti-neutrophil cytoplasmic antibody positive vasculitis in a Japanese population. 29167552 2018
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE We examined five additional SNPs and a sixth SNP haplotype within the PRTN3 promoter region in a family-based association analysis and found no evidence that mutations within PRTN3 are associated with WG diagnosis. 16026591 2005
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
0.600 GeneticVariation disease BEFREE Moreover, we identified genetic distinctions between granulomatosis with polyangiitis and microscopic polyangiitis and between proteinase 3 ANCA vasculitis and myeloperoxidase ANCA vasculitis. 26443607 2016
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE The previously reported strong association of WG with the HLA-DPB1*0401 allele was confirmed in an independent WG sample (n = 108, p(c) = 6.4 x 10(-8)). 17967832 2008
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE The rs3117242 of HLA-DPB1 could be considered a genetic risk factor for GPA in Chinese Han people. 26014903 2017
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease GWASDB Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775 2013
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE A trend toward increased frequency of DPB1*04:01, the risk allele for GPA in European populations, was observed among Japanese patients with PR3-AAV when conditioned on DRB1*13:02 (Padjusted = 0.0021, ORadjusted = 3.48). 27166610 2016
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease GWASCAT Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775 2013
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE In addition, these studies have also shown that different AAV subtypes such as granulomatosis with polyangiitis (Wegener's, GPA) and microscopic polyangiitis (MPA) are underpinned by distinct genetic risk factors, with GPA being associated with HLA-DP, SERPINA1 (encoding α1-antitrypsin), PRTN3 (encoding proteinase-3, PR3, the main GPA-related autoantigen) and SEMA6A (semaphorin 6A), whereas MPA has been mainly associated with HLA-DQ. 24854378 2014
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE In addition, an extended haplotype DPB1*0401/RXRB03 was identified showing an even stronger association with WG ( P=7.13x10(-17), OR=6.41). 14968360 2004
Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
0.480 GeneticVariation disease BEFREE Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775 2013
Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
0.400 GeneticVariation disease GWASDB Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775 2013
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease BEFREE Our results in American patients confirm findings from a Scandinavian cohort in which a positive association between WG and longer alleles of (AT)n in the Ctla4 3'-UTR was demonstrated. 15334480 2004
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease BEFREE The CTLA-4 SNP in the promoter region at position -318 is associated with WG. 12022356 2002
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease BEFREE Furthermore, the non-carriage of CTLA-4 allele 86 was associated with WG formation, while homocygotic carriage of the CCR5 allele delta 32 seemed to prevent ANCA-negative WG. 15675141 2004
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease BEFREE The distribution of cytokine and cytotoxic T cell antigen 4 (CTLA4) gene polymorphisms and HLA class II alleles was analysed in 32 patients with generalised WG and 91 healthy controls. 15708894 2005
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease BEFREE The disease is associated with expanded dinucleotide repeats in the cytotoxic T lymphocyte antigen 4 (CTLA-4) gene, suggesting that genetic variation(s) in T cell related gene(s) could contribute to the T cell hyperactivity in WG. 11838849 2002
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.360 GeneticVariation disease LHGDN Coding sequence 1 and promoter single nucleotide polymorphisms in the CTLA-4 gene in Wegener's granulomatosis. 12022356 2002