Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 80129
Gene Symbol: CCDC170
CCDC170
0.010 Biomarker disease BEFREE Furthermore, some pivotal fusion genes like ESR1-C6orf97 with COBRA1-C9orf167 and VAPB-IKZF3 with ACACA-STAC2 were found in Luminal A and Luminal B breast cancer, respectively. 30446971 2019
Entrez Id: 56477
Gene Symbol: CCL28
CCL28
0.010 Biomarker disease BEFREE The subsequent analysis of the Kaplan-Meier plotter cohort also demonstrated that CCL28 was a favorable prognostic factor for luminal-like cases [luminal A (P<0.001) and luminal B (P=0.031)], but a poor prognostic indicator for the patients with triple-negative phenotype (P<0.001). 31019765 2019
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 AlteredExpression disease BEFREE However, in the Luminal A group, high expression of cyclin D1 correlated with shorter disease-free survival, suggesting that the prognostic role of cyclin D1 depends on the molecular subtype. 29140993 2017
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 Biomarker disease BEFREE ER+ breast cancer patients preferentially demonstrate gain of CCND1 (cyclin D1; 58% in luminal B vs. 29% in luminal A) and CDK4 (25% in luminal B vs. 14% in luminal A) and loss of CDKN2A (p16) and CDKN2C (p18), which are negatively regulated with the cell cycle and are correlated with the CDK4/6/RB pathway. 29086897 2018
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.030 Biomarker disease BEFREE Our results indicate that CCND1 amplification is associated with worse 15-year survival in ER+/LN-/HER2-, luminal A and luminal B patients. 30819233 2019
Entrez Id: 9134
Gene Symbol: CCNE2
CCNE2
0.010 Biomarker disease BEFREE In this work, we demonstrate that stimulation of hERG1 promotes an ubiquitin-proteasome-dependent degradation of cyclin E2 in multiple breast cancer cell lines representing Luminal A, HER2+ and Trastuzumab-resistant breast cancer cells. 25596745 2015
Entrez Id: 1232
Gene Symbol: CCR3
CCR3
0.010 AlteredExpression disease BEFREE The subsequent sensitivity analysis using the systemically untreated patients confirmed that higher mRNA expression of CCR3 was a robust prognostic factor for luminal-A (P=0.0025) and luminal-B (P=0.088), but not for HER2-enriched (P=0.21) and TNBC (P=0.86). 27086913 2016
Entrez Id: 100133941
Gene Symbol: CD24
CD24
0.010 AlteredExpression disease BEFREE Our results suggest that CD24 overexpression is an independent unfavourable prognostic factor in breast cancer, especially for luminal A and TNBC subtypes, and CD24 may be a promising therapeutic target for specific subtypes of breast cancer. 26444008 2015
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.020 AlteredExpression disease BEFREE Higher PD-L1 expression was also found in aggressive breast cancer subtypes e.g. triple negative and HER2 (human epidermal growth factor receptor 2) -positive as compared with subtypes with better prognosis such as luminal A and luminal BHER2-negative (p=0.05). 27468881 2016
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.020 AlteredExpression disease BEFREE Subgroup analysis showed that not PD-L1 RNA expression, but protein expression was associated with shorter survival, in addition, the adverse prognostic effect of PD-L1 expression remained in luminal A, luminal B, and HER2 subtype, not in basal-like or triple-negative subtype. 31008945 2019
Entrez Id: 958
Gene Symbol: CD40
CD40
0.010 AlteredExpression disease BEFREE This finding is further supported by the positive association between the expression of MUC1 and p50 in Luminal A and Luminal B subtypes through analyzing breast cancer databases. 29423058 2018
Entrez Id: 1012
Gene Symbol: CDH13
CDH13
0.010 AlteredExpression disease BEFREE Cadherin 13 (H-cadherin; CDH13) methylation levels were significantly higher in the HER2 tumors compared to the luminal A and basal-like subtypes. 23467623 2013
Entrez Id: 1019
Gene Symbol: CDK4
CDK4
0.010 GeneticVariation disease BEFREE ER+ breast cancer patients preferentially demonstrate gain of CCND1 (cyclin D1; 58% in luminal B vs. 29% in luminal A) and CDK4 (25% in luminal B vs. 14% in luminal A) and loss of CDKN2A (p16) and CDKN2C (p18), which are negatively regulated with the cell cycle and are correlated with the CDK4/6/RB pathway. 29086897 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.010 GeneticVariation disease BEFREE ER+ breast cancer patients preferentially demonstrate gain of CCND1 (cyclin D1; 58% in luminal B vs. 29% in luminal A) and CDK4 (25% in luminal B vs. 14% in luminal A) and loss of CDKN2A (p16) and CDKN2C (p18), which are negatively regulated with the cell cycle and are correlated with the CDK4/6/RB pathway. 29086897 2018
Entrez Id: 1031
Gene Symbol: CDKN2C
CDKN2C
0.010 GeneticVariation disease BEFREE ER+ breast cancer patients preferentially demonstrate gain of CCND1 (cyclin D1; 58% in luminal B vs. 29% in luminal A) and CDK4 (25% in luminal B vs. 14% in luminal A) and loss of CDKN2A (p16) and CDKN2C (p18), which are negatively regulated with the cell cycle and are correlated with the CDK4/6/RB pathway. 29086897 2018
Entrez Id: 1111
Gene Symbol: CHEK1
CHEK1
0.010 AlteredExpression disease BEFREE Most of the genes involved in nucleotide excision repair and Fanconi Anemia pathways, and CHK1 gene were significantly less expressed in TNBC than in LABC. 23825533 2013
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.010 GeneticVariation disease BEFREE CHEK2-I157T variant was associated with the luminal A subtype (P = 0.01), whereas CHEK2-truncating mutations were associated with the luminal B subtype (P = 0.005). 21701879 2012
Entrez Id: 1147
Gene Symbol: CHUK
CHUK
0.010 Biomarker disease BEFREE In the discovery cohort, cytoplasmic IKKα was associated with disease-free survival (p = 0.029) and recurrence-free survival on tamoxifen (p < 0.001) in Luminal A tumours. 28006839 2017
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.010 Biomarker disease BEFREE Moreover, each CIC subtype tended to preferentially affect different categories of breast cancer, with TiT (<i>P</i> < 0.0001) and oCICs (<i>P</i> = 0.008) targeting luminal B (Her2<sup>+</sup>), TiM (<i>P</i> = 0.011) targeting HR<sup>-</sup> (Her2<sup>+</sup>/HR<sup>-</sup> and TNBC), and MiT targeting luminal A (<i>P</i> = 0.017) and luminal B (Her<sup>-</sup>) (<i>P</i> = 0.006). 31681557 2019
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 Biomarker disease BEFREE The stromal IL-8 positivity was associated with shorter DFS and OS in ER positive group, HER-2 negative group, and luminal A group (P < 0.05). 23242618 2013
Entrez Id: 9420
Gene Symbol: CYP7B1
CYP7B1
0.010 Biomarker disease BEFREE Furthermore, liver LXR/RXR signaling pathway was altered between LA and TNBC in AA women and may be due to the deficiency of the CYP7B1 enzyme responsible for cholesterol degradation. 30588086 2019
Entrez Id: 10671
Gene Symbol: DCTN6
DCTN6
0.010 Biomarker disease BEFREE The objective of our study was to determine the association between expression of c-Myc and the loss of p27 by immunohistochemistry (IHC) in the four major subtypes of breast cancer (BC) (Luminal A, Luminal B, HER2, and Triple Negative) and with other clinicopathological factors in a population of 202 African-American (AA) women. 29715580 2018
Entrez Id: 1655
Gene Symbol: DDX5
DDX5
0.010 AlteredExpression disease BEFREE DDX5 protein level was higher in triple-negative basal-like tumors than in non-basal-like tumors, including luminal A, luminal B, and HER2-enriched subtypes. 31015574 2019
Entrez Id: 1950
Gene Symbol: EGF
EGF
0.010 Biomarker disease BEFREE Epidermal growth factor (EGF) receptor (EGFR)/MAPK signaling can induce a switch in MCF-7 breast cancer cells, from an estrogen receptor (ER)alpha-positive, Luminal-A phenotype, to an ERalpha-negative, Basal-like phenotype. 19423651 2009
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.070 Biomarker disease BEFREE Estrogen receptor (ER), progesterone receptor (PR) and human epidermal growth factor receptor (Her2/neu) immunostaining was semi-quantitatively assessed to define molecular subtypes of luminal A and B, HER-2 and triple negative (basal- like) in BC paraffin embedded sections from 115 Saudi female patients diagnosed between 2005 to 2015 at the Department of Pathology, King Fahd Hospital, Almadinah, Saudi Arabia. 26625804 2015