Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1634
Gene Symbol: DCN
DCN
0.010 Biomarker group BEFREE <b>Abbreviations</b>: ACSF: artificial cerebrospinal fluid; AMC: aminomethylcoumarin; BPAN: beta-propeller protein-associated neurodegeneration; CALB1: calbindin 1; CNS: central nervous system; DCN: deep cerebellar nuclei; fEPSP: field excitatory postsynaptic potential; IC: internal capsule; ID: intellectual disability; ISH: <i>in situ</i> hybridization; KO: knockout; LTP: long-term potentiation; MBP: myelin basic protein; MGP: medial globus pallidus; PtdIns3P: phosphoinositide phosphatidylinositol-3-phosphate; WDR45B: WD repeat domain 45B; WIPI1: WD repeat domain, phosphoinositide interacting 1; WT: wild type. 31238825 2020
Entrez Id: 22983
Gene Symbol: MAST1
MAST1
0.010 GeneticVariation group BEFREE Using exome sequencing, we identified a novel missense variant c.3539T>G, p.(Leu1180Arg) in MAST1 in an Emirati patient with intellectual disability, microcephaly, and dysmorphic features. 31721002 2020
Entrez Id: 56997
Gene Symbol: COQ8A
COQ8A
0.010 GeneticVariation group BEFREE Slowly progressive ataxia and intellectual disability were the common clinical manifestations of the patients with homozygous c.1396delG (p. E466Rfs*11) pathogenic variant in COQ8A. 31741144 2020
Entrez Id: 4256
Gene Symbol: MGP
MGP
0.010 Biomarker group BEFREE <b>Abbreviations</b>: ACSF: artificial cerebrospinal fluid; AMC: aminomethylcoumarin; BPAN: beta-propeller protein-associated neurodegeneration; CALB1: calbindin 1; CNS: central nervous system; DCN: deep cerebellar nuclei; fEPSP: field excitatory postsynaptic potential; IC: internal capsule; ID: intellectual disability; ISH: <i>in situ</i> hybridization; KO: knockout; LTP: long-term potentiation; MBP: myelin basic protein; MGP: medial globus pallidus; PtdIns3P: phosphoinositide phosphatidylinositol-3-phosphate; WDR45B: WD repeat domain 45B; WIPI1: WD repeat domain, phosphoinositide interacting 1; WT: wild type. 31238825 2020
Entrez Id: 1063
Gene Symbol: CENPF
CENPF
0.010 GeneticVariation group BEFREE Stromme syndrome.Jejunal atresia with microcephaly and ocular anomalies.Apple peel syndrome with microcephaly and ocular anomalies.Ciliopathy phenotype.Primary microcephaly and intellectual disability.OMIM# of the disease 243605.Name of the analysed genes or DNA/chromosome segments CENPF.OMIM# of the gene(s) 600236.Review of the analytical and clinical validity as well as of the clinical utility of DNA-based testing for mutations in CENPF genes in diagnostic, prenatal settings, and for risk assessment in relatives. 31488893 2020
Entrez Id: 2016
Gene Symbol: EMX1
EMX1
0.010 Biomarker group BEFREE Here, by crossing <i>Emx1-cre</i> mice with <i>Brpf1<sup>fl/fl</sup></i> mice, we generated <i>Brpf1</i> heterozygous mice to model <i>BRPF1</i>-related ID. 31213987 2019
Entrez Id: 1270
Gene Symbol: CNTF
CNTF
0.010 Biomarker group BEFREE CNTF may be considered as a potential biomarker candidate for ASDs in the context of severe ID. 29869578 2019
Entrez Id: 1487
Gene Symbol: CTBP1
CTBP1
0.010 Biomarker group BEFREE Within this cohort, we identified consistent CtBP1-related phenotypes of intellectual disability, ataxia, hypotonia, and tooth enamel defects present in most patients. 31041561 2019
Entrez Id: 84173
Gene Symbol: ELMOD3
ELMOD3
0.010 GeneticVariation group BEFREE Our result supports the implication of ELMOD3 in hearing loss and highlights the potential clinical relevance of 2p11.2 deletion in autism and/or intellectual disability. 30284680 2019
Entrez Id: 90161
Gene Symbol: HS6ST2
HS6ST2
0.010 GeneticVariation group BEFREE A HS6ST2 gene variant associated with X-linked intellectual disability and severe myopia in two male twins. 30471091 2019
Entrez Id: 55531
Gene Symbol: ELMOD1
ELMOD1
0.010 Biomarker group BEFREE ELMO Domain Containing 1 (ELMOD1) Gene Mutation Is Associated with Mental Retardation and Autism Spectrum Disorder. 31327155 2019
Entrez Id: 9814
Gene Symbol: SFI1
SFI1
0.010 Biomarker group BEFREE Mammalian SFI1 interacts with USP9X, a deubiquitylase associated with human syndromic mental retardation. 31197030 2019
Entrez Id: 106480993
Gene Symbol: RN7SL263P
RN7SL263P
0.010 Biomarker group BEFREE The lipid peroxidation of PBMC and RBC membranes, levels of serum glutamate, serotonin, homocysteine, ROS, lactate and LDH-A expression increased significantly with severity of ID whereas changes in RBC membrane β-actin, serum BDNF, TNF-α and IL-6 was found non-significant. 31541143 2019
Entrez Id: 149420
Gene Symbol: PDIK1L
PDIK1L
0.010 GeneticVariation group BEFREE In recent studies, de novo variants in CSNK2A1 and CSNK2B, which encode the subunits of CK2, have been identified in individuals with intellectual disability syndrome. 30655572 2019
Entrez Id: 4782
Gene Symbol: NFIC
NFIC
0.010 GeneticVariation group BEFREE The possibility of variants in NFI genes should therefore be considered in individuals with intellectual disability and brain overgrowth, with individual NFI-related conditions being differentiated from one another by additional signs and symptoms. 31730271 2019
Entrez Id: 23677
Gene Symbol: SH3BP4
SH3BP4
0.010 Biomarker group BEFREE Here, using oligoarray-based comparative genomic hybridization, we identified a de novo deletion at 2q37.2 locus spanning 1 Mb and encompassing AGAP1 and SH3BP4, in a boy with autism and intellectual disability. 30472483 2019
Entrez Id: 10116
Gene Symbol: FEM1B
FEM1B
0.010 Biomarker group BEFREE We identified FEM1B and GNAI2 as good candidate genes for syndromic intellectual disability and confirmed the implication of ACTL6B in a neurodevelopmental disorder. 31036916 2019
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.010 Biomarker group BEFREE For real data, we successfully identified three genes, namely, ANK3, MEIS2, and TLR4, which have significant associations with mental retardation, learning disabilities and age according to previous research. 30584014 2019
Entrez Id: 10215
Gene Symbol: OLIG2
OLIG2
0.010 Biomarker group BEFREE Studies in mice suggest that Olig2 gene dosage alters cerebral cortical interneuron development and contributes to trisomy-21/Down-syndrome-related intellectual disability.Xu et al. 31173710 2019
Entrez Id: 3985
Gene Symbol: LIMK2
LIMK2
0.010 Biomarker group BEFREE LIMK2-1 is a Hominidae-Specific Isoform of LIMK2 Expressed in Central Nervous System and Associated with Intellectual Disability. 30594563 2019
Entrez Id: 378484
Gene Symbol: MRX82
MRX82
0.010 GeneticVariation group BEFREE Using NGS, we resolved the genetic cause of MRX82 (OMIM number 300518), a large Spanish Basque family with five affected males with intellectual disability and a wide phenotypic variability among them despite having the same pathogenic variant. 31737052 2019
Entrez Id: 20
Gene Symbol: ABCA2
ABCA2
0.010 GeneticVariation group BEFREE Although recessively inherited ABCA2 variants have been reported in two patients who had intellectual disability with global developmental delays, our study demonstrates the role of an ABCA2 variant in the pathogenesis of ataxia with dysarthria. 31047799 2019
Entrez Id: 26038
Gene Symbol: CHD5
CHD5
0.010 Biomarker group BEFREE We explore the field through the lens of Chd3, Chd4, and Chd5 proteins, which incorporate into the nucleosome remodeling and deacetylase (NuRD) complex, and the related proteins Chd7 and Chd8, implicated in the pathogenesis of intellectual disability and autism spectrum disorders. 31146125 2019
Entrez Id: 8841
Gene Symbol: HDAC3
HDAC3
0.010 Biomarker group BEFREE We describe de novo variants in NCOR1, NCOR2 or HDAC3 in patients with intellectual disability or neurodevelopmental disorders. 30664766 2019
Entrez Id: 5662
Gene Symbol: PSD
PSD
0.010 GeneticVariation group BEFREE Mutations within the <i>Shank3</i> gene, which encodes a key postsynaptic density (PSD) protein at glutamatergic synapses, contribute to the genetic etiology of defined autism spectrum disorders (ASDs), including Phelan-McDermid syndrome (PMS) and intellectual disabilities (ID). 30971895 2019