Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.600 GeneticVariation group BEFREE Polymorphisms in the MED13L gene have been linked to congenital heart anomalies and intellectual disabilities. 29951696 2018
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.600 GeneticVariation group BEFREE Review of the reported patients with MED13L haploinsufficiency indicates moderate to severe ID and facial anomalies in all patients, as well as severe speech delay and muscular hypotonia in the majority. 28645799 2017
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.600 GeneticVariation group BEFREE One of the individuals, suspected of MED13L-related intellectual disability, based on clinical features, was identified by Sanger sequencing. 29959045 2019
Entrez Id: 8242
Gene Symbol: KDM5C
KDM5C
0.600 GeneticVariation group BEFREE DNA methylation fingerprint of monozygotic twins and their singleton sibling with intellectual disability carrying a novel KDM5C mutation. 31419599 2020
Entrez Id: 8242
Gene Symbol: KDM5C
KDM5C
0.600 GeneticVariation group BEFREE A novel c.2T > C mutation of the KDM5C/JARID1C gene in one large family with X-linked intellectual disability. 22326837 2012
Entrez Id: 23389
Gene Symbol: MED13L
MED13L
0.600 GeneticVariation group BEFREE Recently, a homozygous missense mutation in MED13L was found in two siblings with non-syndromic ID from a consanguineous family. 23403903 2013
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.550 GeneticVariation group BEFREE Homozygous mutations in PRRT2 have also been reported in two families with intellectual disability (ID) and seizures. 23566103 2013
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.550 GeneticVariation group BEFREE PRRT2 is a candidate gene for ASD since homozygote mutations are associated with intellectual disability and heterozygote mutations cause benign infantile seizures, paroxysmal dyskinesia, or hemiplegic migraine. 24594579 2014
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.550 GeneticVariation group BEFREE Beyond these clinical entities, PRRT2 mutations have been described in other childhood-onset movement disorders, different forms of seizures, headache disorders, and intellectual disability. 26598493 2015
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.550 GeneticVariation group BEFREE PRRT2 mutations are associated with a wide range of clinical syndromes: the various paroxysmal dyskinesias, infantile seizures, paroxysmal torticollis, migraine, hemiplegic migraine, episodic ataxia and even intellectual disability in the homozygous state. 23398397 2013
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.550 GeneticVariation group BEFREE This family provides strong evidence that homozygous PRRT2 mutations give rise to more severe clinical disease of mental retardation, episodic ataxia, and absences, and, thus, enlarges the clinical spectrum related to PRRT2 mutations. 23126439 2012
Entrez Id: 55621
Gene Symbol: TRMT1
TRMT1
0.520 GeneticVariation group BEFREE The Role of a Novel TRMT1 Gene Mutation and Rare GRM1 Gene Defect in Intellectual Disability in Two Azeri Families. 26308914 2015
Entrez Id: 131669
Gene Symbol: UROC1
UROC1
0.510 GeneticVariation group BEFREE This report describes the first putative mutations, p.L70P and p.R450C, in the coding region of the UROC1 gene in a girl with urocanic aciduria presenting with mental retardation and intermittent ataxia. 19304569 2009
Entrez Id: 6535
Gene Symbol: SLC6A8
SLC6A8
0.500 GeneticVariation group BEFREE The X-linked creatine transporter deficiency (CRTD) caused by an SLC6A8 mutation represents the second most common cause of X-linked intellectual disability. 28065824 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group BEFREE Consistent with this notion is the recent demonstration that MECP2 mutations cause Rett syndrome (RTT, MIM 312750), a childhood neurological disorder that represents one of the most common causes of mental retardation in females. 11242118 2001
Entrez Id: 5080
Gene Symbol: PAX6
PAX6
0.500 GeneticVariation group BEFREE The remaining four had chromosomal rearrangements: an unbalanced translocation, t(11;13), with a deletion including the WAGR (Wilms' tumor, aniridia, genitourinary abnormalities, and mental retardation) region, and three balanced rearrangements with what appear to be position effect breakpoints 3' of PAX6: (a) a t(7;11) with the 11p13 breakpoint approximately 30 kb downstream of PAX6, (b) a dir ins(12;11) with a breakpoint >50 kb from PAX6, and (c) an inv(11)(p13q13) with a breakpoint >75 kb downstream of PAX6. 12386836 2002
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group BEFREE This study examined the effects of sedation on auditory brainstem response interpeak latency intervals (i.e., I-III, III-V, and I-V) in two groups: (1) a group with Rett syndrome who were positive for mutations in the MECP2 gene and (2) a group negative for mutations in the MECP2 gene but who were severely to profoundly delayed with other causes of mental retardation. 20399386 2010
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group BEFREE The purpose of this study was to investigate the role of evolutionarily conserved cis-elements in regulating the post-transcriptional expression of the MECP2 gene and to explore their possible correlations with a mutation that is known to cause mental retardation. 24040966 2013
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group BEFREE Mutations in MECP2 cause classic or preserved speech variant Rett syndrome and intellectual disability in females and early demise or marked neurodevelopmental handicap in males. 18989701 2009
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group LHGDN Mutations of the MECP2 (methyl-CpG-binding protein) gene mainly cause Rett syndrome but were also shown to be involved in mental retardation. 17383248 2007
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation group BEFREE Furthermore, duplication of the MECP2 genomic region results in mental retardation with speech and social problems. 18321864 2008
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.500 GeneticVariation group BEFREE High proportion of 22q13 deletions and SHANK3 mutations in Chinese patients with intellectual disability. 22509352 2012
Entrez Id: 10084
Gene Symbol: PQBP1
PQBP1
0.500 GeneticVariation group BEFREE Frame shift mutations of the polyglutamine binding protein-1 (PQBP1) gene lead to total or partial truncation of the C-terminal domain (CTD) and cause mental retardation in human patients. 16597440 2006
Entrez Id: 10084
Gene Symbol: PQBP1
PQBP1
0.500 GeneticVariation group BEFREE A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation. 17033686 2007
Entrez Id: 8831
Gene Symbol: SYNGAP1
SYNGAP1
0.500 GeneticVariation group BEFREE Our data strongly suggest that the SYNGAP1 variant is causative of intellectual disability in this patient. 29381230 2018