Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8647
Gene Symbol: ABCB11
ABCB11
0.010 AlteredExpression disease BEFREE The histone methyltransferase, Mixed-lineage leukemia-4 (MLL4), is a transcriptional coactivator of the BA-sensing nuclear receptor, Farnesoid-X-Receptor (FXR), and epigenetically upregulates FXR targets important for the regulation of BA levels, Small Heterodimer Partner (SHP) and Bile Salt Export Pump (BSEP). 31549733 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.030 GeneticVariation disease BEFREE The WHO 2008 classification further delineated three categories: associated with t(9;22)/BCR-ABL1 fusion gene, associated with KMT2A (mixed lineage leukemia) rearrangements, and nonotherwise specified. 31033213 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.030 Biomarker disease BEFREE Disruption of Met/SAM metabolism, by either methionine deprivation or pharmacologic inhibition of downstream metabolism, reduced overall cellular methylation potential, reduced relative cell numbers, and induced apoptosis selectively in established MLL-AF4 cell lines or MLL-AF6-expressing patient blasts but not in BCR-ABL-driven K562 cells. 31717699 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.030 AlteredExpression disease BEFREE The comparison of MLL-AFF1 cases with the ABL1 group identified 477 genes being differentially expressed at the statistically significant level of p<0.05, with 296 and 181 genes up- and down-regulated, respectively, in the MLL-AFF1 cases. 22993334 2012
Entrez Id: 4301
Gene Symbol: AFDN
AFDN
0.020 GeneticVariation disease BEFREE Five translocations account for approximately 80% of MLL rearrangements: t(4;11)(q21;q23), AFF1/MLL; t(6;11)(q27;q23), MLLT4/MLL; t(9;11)(p22;q23), MLLT3/MLL; t(11;19)(q23;p13.1), MLL/ELL; and t(11;19)(q23;p13.3), MLL/MLLT1. 20539022 2010
Entrez Id: 4301
Gene Symbol: AFDN
AFDN
0.020 Biomarker disease BEFREE Disruption of Met/SAM metabolism, by either methionine deprivation or pharmacologic inhibition of downstream metabolism, reduced overall cellular methylation potential, reduced relative cell numbers, and induced apoptosis selectively in established MLL-AF4 cell lines or MLL-AF6-expressing patient blasts but not in BCR-ABL-driven K562 cells. 31717699 2019
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 GeneticVariation disease BEFREE In the other patient, the MLL breakpoint was located in intron 11 at nucleotide position chr11:118359130-32 and the AFF1 break was in intron 3 at nucleotide position chr4:87996215-17. 24310817 2014
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 GeneticVariation disease BEFREE AF4 gene, frequently translocated with mixed-lineage leukemia (MLL) in childhood acute leukemia, encodes a putative transcriptional activator of the AF4/LAF4/FMR2 (ALF) protein family previously implicated in lymphopoiesis and Purkinje cell function in the cerebellum. 17135274 2007
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 Biomarker disease BEFREE However, subsequent reverse transcriptase-polymerase chain reaction for the expected mixed lineage leukemia [trithorax homolog, Drosophila] (MLL)-AFF1 fusion transcript was negative. 20633769 2010
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 AlteredExpression disease BEFREE We also found that exogenous expression of miR-142-3p strongly reduced the expression of MLL-AF4 target genes such as homeobox A (HOXA)9, HOXA7, and HOXA10 in RS4;11 cells. 24057258 2013
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 Biomarker disease BEFREE The findings demonstrated abnormal D-FISH results for 24 of 25 AFF1/MLL, 19 of 20 MLLT4/MLL, all 20 MLLT3/MLL, all 18 MLL/ELL, and all 20 MLL/MLLT1 samples, confirming the efficacy of these D-FISH assays in detecting these common MLL/partner translocations. 20539022 2010
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 AlteredExpression disease BEFREE We uncovered both common as well as specific MLL-AF9 and MLL-AF4 target genes, which were all marked by H3K79me2, H3K27ac and H3K4me3. 28114278 2017
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 GeneticVariation disease BEFREE The most common MLL mutation in acute lymphoblastic leukemia is the t(4;11)(q21;q23) chromosome translocation that fuses MLL in-frame with the AF4 gene producing MLL-AF4 and AF4-MLL fusion proteins. 27856324 2017
Entrez Id: 4299
Gene Symbol: AFF1
AFF1
0.080 AlteredExpression disease BEFREE The comparison of MLL-AFF1 cases with the ABL1 group identified 477 genes being differentially expressed at the statistically significant level of p<0.05, with 296 and 181 genes up- and down-regulated, respectively, in the MLL-AFF1 cases. 22993334 2012
Entrez Id: 27125
Gene Symbol: AFF4
AFF4
0.030 Biomarker disease BEFREE Recently in Molecular Cell, Lin et al.(2010) showed that multiple MLL-fusion proteins implicated in mixed-lineage leukemia (MLL) associate with AFF4, ELLs, and the positive transcription elongation factor P-TEFb, providing evidence that the dysregulated gene expression in MLL patients is due to aberrant transcription elongation. 20188661 2010
Entrez Id: 27125
Gene Symbol: AFF4
AFF4
0.030 Biomarker disease BEFREE Further understanding of the function of AF5q31 as well as the specific leukemogenic mechanism of MLL-AF5q31 awaits future studies. 12399976 2002
Entrez Id: 27125
Gene Symbol: AFF4
AFF4
0.030 GeneticVariation disease BEFREE AF5q31 (also called MCEF) was identified by its involvement in chromosomal translocation with the gene MLL (mixed lineage leukemia), which is associated with infant acute lymphoblastic leukemia. 16024815 2005
Entrez Id: 173
Gene Symbol: AFM
AFM
0.020 GeneticVariation disease BEFREE AF4 gene, frequently translocated with mixed-lineage leukemia (MLL) in childhood acute leukemia, encodes a putative transcriptional activator of the AF4/LAF4/FMR2 (ALF) protein family previously implicated in lymphopoiesis and Purkinje cell function in the cerebellum. 17135274 2007
Entrez Id: 173
Gene Symbol: AFM
AFM
0.020 Biomarker disease BEFREE Taspase1, a highly conserved threonine protease, cleaves nuclear transcriptional regulators mixed-lineage leukemia (MLL, MLL1), MLL2, TFIIA, and ALF to orchestrate a wide variety of biological processes. 25267403 2014
Entrez Id: 100310785
Gene Symbol: ALL1
ALL1
0.020 Biomarker disease BEFREE Reduction of mixed-lineage leukemia (MLL)-ALL-1 fused gene from chromosome 4 (AF4) levels induces apoptosis associated with caspase-3 activation and diminished BCL-X(L) expression. 16046533 2005
Entrez Id: 100310785
Gene Symbol: ALL1
ALL1
0.020 Biomarker disease BEFREE The poor prognosis of lymphoblastic leukemia in children under 1 year of age is attributed largely to rearrangements involving the mixed lineage leukemia (mll, also known as all1, htrx, trx1, or hrx) gene that occur with increased frequency in this population. 15454841 2004
Entrez Id: 240
Gene Symbol: ALOX5
ALOX5
0.010 AlteredExpression disease BEFREE Our data show that induction of 5-LO promoter activity by SMAD3/4 is MLL-dependent and that knockdown of the MLL complex component MEN1 attenuates the SMAD effect. 28803964 2017
Entrez Id: 290
Gene Symbol: ANPEP
ANPEP
0.010 Biomarker disease BEFREE In B-precursor ALL, NG2 expression was significantly associated with a CD10(-)/CD34(-)/CD24(-)/CD65s(+)/CD15(+)/CD13(-)/CD33(-) phenotype and showed a sensitivity, specificity and positive predictive value of 0.89, 0.89, and 0.93 for MLL rearrangement, respectively. 12886247 2003
Entrez Id: 367
Gene Symbol: AR
AR
0.030 Biomarker disease BEFREE The MLL protein complex has been shown to interact with the androgen receptor via the MLL-menin subunit, thus promoting gene activation. 27705736 2016
Entrez Id: 367
Gene Symbol: AR
AR
0.030 Biomarker disease BEFREE Upon androgen stimulation, AR recruits the Protein kinase N1 (PKN1), which phosphorylates histone H3 at threonine 11, with subsequent recruitment of tryptophan, aspartic acid (WD) repeat-containing protein 5 (WDR5) and the su(var)3-9, enhancer of zeste, trithorax/mixed-lineage leukemia (SET1/MLL) histone methyltransferase complex to promote AR target gene activation and prostate cancer cell growth. 27268279 2016