Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 404663
Gene Symbol: LINC01194
LINC01194
0.010 Biomarker disease BEFREE Detection of JC virus DNA sequence and expression of the viral oncoprotein, tumor antigen, in brain of immunocompetent patient with oligoastrocytoma. 8692997 1996
Entrez Id: 7076
Gene Symbol: TIMP1
TIMP1
0.010 Biomarker disease BEFREE We investigated the gene expression profiles of MMPs 1, 2, 3, 7, 9, 12, 13, 14, 16 and of TIMPs 1, 2, 3, and 4 in various primary brain tumors (astrocytoma WHO grade I-III, glioblastoma, PNET, ependymoma III and oligoastrocytoma II) using novel RNase protection assay probe sets. 11398836 2001
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE A p53 missense mutation was detected at codon 161 (GCC-->ACC, Ala-->Thr) in only one oligoastrocytoma without allelic loss. 12507133 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE Loss of 1p and 19q were associated with LGO but not LGOA (P =.009), were inversely associated with p53 detection, and were not associated with response to PCV (possibly because of the small sample size). 12525516 2003
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE The presence of TP53 mutations was associated with shorter survival of patients with low-grade diffuse gliomas (log-rank test; P=0.047), but when each histological type was analyzed separately, an association was observed only for oligoastrocytoma ( P=0.05). 15118874 2004
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE TP53 mutations are common early events in the pathogenesis of WHO Grade II astrocytoma or oligoastrocytoma. 15329912 2004
Entrez Id: 1641
Gene Symbol: DCX
DCX
0.010 AlteredExpression disease BEFREE DCX was highly expressed in both high-grade invasive tumors (glioblastoma, n=11; anaplastic astrocytoma/oligoastrocytoma, n=7; and medulloblastoma/PNET, n=6) and low-grade invasive tumors (oligodendroglioma, n=3; and astrocytoma/oligoastrocytoma, n=5). 16195916 2005
Entrez Id: 4288
Gene Symbol: MKI67
MKI67
0.020 AlteredExpression disease BEFREE Herein, we report on comparative genomic hybridization (CGH) and immunohistochemical (IHC) assessment of EGFR, PTEN, p53, and MIB-1 expression in 13 oligodendrogliomas (10 WHO grade II, 3 WHO grade III), one oligoastrocytoma (WHO grade III) and 23 high-grade astrocytomas (3 WHO grade III, 20 glioblastoma multiforme). 17390041 2007
Entrez Id: 57534
Gene Symbol: MIB1
MIB1
0.020 AlteredExpression disease BEFREE Herein, we report on comparative genomic hybridization (CGH) and immunohistochemical (IHC) assessment of EGFR, PTEN, p53, and MIB-1 expression in 13 oligodendrogliomas (10 WHO grade II, 3 WHO grade III), one oligoastrocytoma (WHO grade III) and 23 high-grade astrocytomas (3 WHO grade III, 20 glioblastoma multiforme). 17390041 2007
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.010 Biomarker disease BEFREE Herein, we report on comparative genomic hybridization (CGH) and immunohistochemical (IHC) assessment of EGFR, PTEN, p53, and MIB-1 expression in 13 oligodendrogliomas (10 WHO grade II, 3 WHO grade III), one oligoastrocytoma (WHO grade III) and 23 high-grade astrocytomas (3 WHO grade III, 20 glioblastoma multiforme). 17390041 2007
Entrez Id: 4267
Gene Symbol: CD99
CD99
0.010 AlteredExpression disease BEFREE Thus, we investigated the expression of CD99 in an additional series of brain tumors with clear cell morphology, including oligoastrocytoma (7 cases), central neurocytoma (6), and dysembryoplastic neuroepithelial tumor (9). 18552083 2008
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker disease BEFREE These GFAP/hPDGFB mice also developed spinal oligoastrocytoma. 18922925 2008
Entrez Id: 57534
Gene Symbol: MIB1
MIB1
0.020 GeneticVariation disease BEFREE Patients with newly diagnosed oligodendroglioma or oligoastrocytoma with a MIB-1 index of >5% or recurrent low-grade gliomas received temozolomide (75 mg/m(2)/day in 11-week cycles of 7 weeks on/4 weeks off). 19118062 2009
Entrez Id: 4288
Gene Symbol: MKI67
MKI67
0.020 GeneticVariation disease BEFREE Patients with newly diagnosed oligodendroglioma or oligoastrocytoma with a MIB-1 index of >5% or recurrent low-grade gliomas received temozolomide (75 mg/m(2)/day in 11-week cycles of 7 weeks on/4 weeks off). 19118062 2009
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.070 GeneticVariation disease BEFREE The molecular classification on the basis of IDH1/2 mutation, TP53 mutation, and 1p/19q loss has power similar to histological classification and avoids the ambiguity inherent to the diagnosis of oligoastrocytoma. 21075857 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation disease BEFREE The molecular classification on the basis of IDH1/2 mutation, TP53 mutation, and 1p/19q loss has power similar to histological classification and avoids the ambiguity inherent to the diagnosis of oligoastrocytoma. 21075857 2010
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.010 PosttranslationalModification disease BEFREE We analyzed 154 primary glioma tumors (37 astrocytoma II and III, 52 primary glioblastoma multiforme (GBM), 11 secondary GBM, 54 oligodendroglioma/oligoastrocytoma II and III) and 13 nonmalignant brain tissues for aberrant methylation with quantitative methylation-specific PCR (qMS-PCR) and for EZH2 and IGFBP2 expression with quantitative reverse transcription PCR (qRT-PCR). 21339190 2011
Entrez Id: 3485
Gene Symbol: IGFBP2
IGFBP2
0.010 PosttranslationalModification disease BEFREE We analyzed 154 primary glioma tumors (37 astrocytoma II and III, 52 primary glioblastoma multiforme (GBM), 11 secondary GBM, 54 oligodendroglioma/oligoastrocytoma II and III) and 13 nonmalignant brain tissues for aberrant methylation with quantitative methylation-specific PCR (qMS-PCR) and for EZH2 and IGFBP2 expression with quantitative reverse transcription PCR (qRT-PCR). 21339190 2011
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.070 GeneticVariation disease BEFREE Only one patient with grade-II oligoastrocytoma had an IDH1 mutation. 22978341 2012
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.070 GeneticVariation disease BEFREE The IDH1 R132H was expressed in the 2 cases with oligoastrocytoma: In 1, NIs and the astrocytoma-like area as well as the oligodendroglioma-like area were positive. 22385787 2012
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.010 PosttranslationalModification disease BEFREE Analysis of CIC-associated CpG island methylation in oligoastrocytoma. 23521081 2013
Entrez Id: 81621
Gene Symbol: KAZALD1
KAZALD1
0.010 Biomarker disease BEFREE We found that KAZALD1 was hypomethylated in high-grade glioma (anaplastic gliomas and glioblastomas) compared to low-grade glioma (astrocytoma, oligodendrocytoma and oligoastrocytoma) using methylation microarrays (p<0.001). 24002581 2013
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.070 AlteredExpression disease BEFREE These results suggest that nestin level and IDH 1/2 mutation status are strong prognostic features in A+OA II-III and possibly more helpful for treatment planning than routine histopathological variables such as oligodendroglial component (astrocytoma vs. oligoastrocytoma) and WHO grade (grade II vs. III). 24519516 2014
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 GeneticVariation disease BEFREE In oligodendroglioma (OG) and oligoastrocytoma (OA), presence of 1p/19q codeletions is highly predictive of response to treatment and is often associated with the methylated MGMT promoter; hence, this study queries whether the presence of 1p/19q codeletions in OG/OA correlates with a higher rate of PsP following therapy. 24285548 2014
Entrez Id: 10763
Gene Symbol: NES
NES
0.010 AlteredExpression disease BEFREE These results suggest that nestin level and IDH 1/2 mutation status are strong prognostic features in A+OA II-III and possibly more helpful for treatment planning than routine histopathological variables such as oligodendroglial component (astrocytoma vs. oligoastrocytoma) and WHO grade (grade II vs. III). 24519516 2014