Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.130 Biomarker disease BEFREE The Zic3 mouse model provides a novel tool to dissect the mechanistic underpinnings of conduction system patterning and dysfunction and its relationship to cardiovascular malformations, making it a promising model to improve understanding and risk assessment in the clinical arena. 20581739 2010
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.130 GeneticVariation disease BEFREE In humans, loss-of-function mutations in ZIC3 cause isolated cardiovascular malformations and X-linked heterotaxy, a disorder with abnormal left-right asymmetry of organs. 23303524 2013
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.130 GeneticVariation disease BEFREE Mutations in Zinc Finger Protein of the Cerebellum 3 (ZIC3) cause X-linked heterotaxy and isolated cardiovascular malformations. 23999067 2013
Entrez Id: 2146
Gene Symbol: EZH2
EZH2
0.110 GeneticVariation disease BEFREE We identified a wide spectrum of cardiovascular malformations in the Ezh2 mutant mice, which collectively led to perinatal death. 22312437 2012
Entrez Id: 2316
Gene Symbol: FLNA
FLNA
0.110 GeneticVariation disease BEFREE Human Filamin A gene (FLNA) mutations are associated with classical X-linked bilateral periventricular nodular heterotopia (PNH), featuring contiguous heterotopic nodules, mega cisterna magna, cardiovascular malformations and epilepsy. 16684786 2006
Entrez Id: 23414
Gene Symbol: ZFPM2
ZFPM2
0.110 Biomarker disease BEFREE Exome sequencing identifies ZFPM2 as a cause of familial isolated congenital diaphragmatic hernia and possibly cardiovascular malformations. 24769157 2015
Entrez Id: 2626
Gene Symbol: GATA4
GATA4
0.110 Biomarker disease BEFREE Furthermore, the mutation abolished the synergistic activation between HAND1 and GATA4, another crucial cardiac transcription factors that has been associated with various congenital cardiovascular malformations and DCM. 26581070 2016
Entrez Id: 2627
Gene Symbol: GATA6
GATA6
0.110 GeneticVariation disease BEFREE Verified segmental deletion or duplications were not directly associated with cardiovascular malformations except in DAAM1 and GATA6. 23678296 2013
Entrez Id: 55803
Gene Symbol: ADAP2
ADAP2
0.010 Biomarker disease BEFREE Overall, our findings indicate that ADAP2 has a role in heart development, and might be a reliable candidate gene for the occurrence of cardiovascular malformations in patients with NF1 microdeletion and, more generally, for the occurrence of a subset of congenital heart defects. 24711647 2014
Entrez Id: 9421
Gene Symbol: HAND1
HAND1
0.010 AlteredExpression disease BEFREE Furthermore, the mutation abolished the synergistic activation between HAND1 and GATA4, another crucial cardiac transcription factors that has been associated with various congenital cardiovascular malformations and DCM. 26581070 2016
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.010 GeneticVariation disease BEFREE Vascular malformations have a prevalence of 19%, with further evidence that complex cardiovascular malformations may be related to PTEN mutations; 31% of patients present hamartomas. 30528446 2019
Entrez Id: 4086
Gene Symbol: SMAD1
SMAD1
0.010 GeneticVariation disease BEFREE Within our clinical cohort, we also observed heterozygous LOF variants in JARID2 and SMAD1 in individuals with cardiac phenotypes, and collectively, carriers of LOF variants in our candidate genes had a four times higher odds of having CVM (odds ratio = 4.0, 95% confidence interval 2.5-6.5). 29089047 2017
Entrez Id: 55349
Gene Symbol: CHDH
CHDH
0.010 Biomarker disease BEFREE The diagnostic accuracy of 320-row CT in complex CHD was 99.4% for intracardiac cardiovascular malformations, 99.8% for extracardiac cardiovascular malformations, and 100% for other malformations. 29482117 2018
Entrez Id: 10611
Gene Symbol: PDLIM5
PDLIM5
0.010 Biomarker disease BEFREE The LIM homeodomain transcriptor factor ISL1 is a marker for undifferentiated cardiac progenitor cells that give rise to both the right ventricle and the inflow and outflow tracts, which are affected by several cardiovascular malformations. 23229290 2013
Entrez Id: 23002
Gene Symbol: DAAM1
DAAM1
0.010 GeneticVariation disease BEFREE Verified segmental deletion or duplications were not directly associated with cardiovascular malformations except in DAAM1 and GATA6. 23678296 2013
Entrez Id: 30008
Gene Symbol: EFEMP2
EFEMP2
0.010 GeneticVariation disease BEFREE Mice lacking expression of the elastic fiber genes elastin ( Eln<sup>-/-</sup>), fibulin-4 ( Efemp2<sup>-/-</sup>), or lysyl oxidase ( Lox<sup>-/-</sup>) die at birth with severe cardiovascular malformations. 30312140 2018
Entrez Id: 4015
Gene Symbol: LOX
LOX
0.010 GeneticVariation disease BEFREE Mice lacking expression of the elastic fiber genes elastin ( Eln<sup>-/-</sup>), fibulin-4 ( Efemp2<sup>-/-</sup>), or lysyl oxidase ( Lox<sup>-/-</sup>) die at birth with severe cardiovascular malformations. 30312140 2018
Entrez Id: 4985
Gene Symbol: OPRD1
OPRD1
0.010 Biomarker disease BEFREE PM<sub>10</sub> levels were positively associated with the risks of atrial septal defect (aORs ranging from 1.29 to 2.17), patent ductus arteriosus [aORs = 1.54, 1.63; 95% confidence intervals (CIs): 1.17, 2.23; 1.06, 3.24], overall fetal cardiovascular malformations (aOR = 1.28; 95% CI: 1.03, 1.61), ventricular septal defect (aOR = 1.19; 95% CI: 1.00, 1.43), and tetralogy of Fallot (aOR = 1.44; 95% CI: 1.01, 2.19) in the various observed periods scaled by 10 d or 1 mo in the first and second gestation months. 28557713 2017
Entrez Id: 10163
Gene Symbol: WASF2
WASF2
0.010 Biomarker disease BEFREE Positional candidate genes which may contribute to the development of cardiovascular malformations associated with 1p36 deletions include DVL1, SKI, RERE, PDPN, SPEN, CLCNKA, ECE1, HSPG2, LUZP1, and WASF2. 24454898 2014
Entrez Id: 4838
Gene Symbol: NODAL
NODAL
0.010 GeneticVariation disease BEFREE Here we have investigated whether variants in NODAL are present in patients with heterotaxy and/or isolated cardiovascular malformations (CVM) thought to be caused by abnormal heart tube looping. 19064609 2009
Entrez Id: 3720
Gene Symbol: JARID2
JARID2
0.010 GeneticVariation disease BEFREE Within our clinical cohort, we also observed heterozygous LOF variants in JARID2 and SMAD1 in individuals with cardiac phenotypes, and collectively, carriers of LOF variants in our candidate genes had a four times higher odds of having CVM (odds ratio = 4.0, 95% confidence interval 2.5-6.5). 29089047 2017
Entrez Id: 7026
Gene Symbol: NR2F2
NR2F2
0.010 Biomarker disease BEFREE The results pinpoint haploinsufficiency of NR2F2 as a cause of CDH and cardiovascular malformations. 24122781 2013
Entrez Id: 3670
Gene Symbol: ISL1
ISL1
0.010 Biomarker disease BEFREE The LIM homeodomain transcriptor factor ISL1 is a marker for undifferentiated cardiac progenitor cells that give rise to both the right ventricle and the inflow and outflow tracts, which are affected by several cardiovascular malformations. 23229290 2013
Entrez Id: 1855
Gene Symbol: DVL1
DVL1
0.010 GeneticVariation disease BEFREE Positional candidate genes which may contribute to the development of cardiovascular malformations associated with 1p36 deletions include DVL1, SKI, RERE, PDPN, SPEN, CLCNKA, ECE1, HSPG2, LUZP1, and WASF2. 24454898 2014
Entrez Id: 8621
Gene Symbol: CDK13
CDK13
0.010 GeneticVariation disease BEFREE De novo missense variants in CDK13 have been described as the cause of syndromic congenital heart defects in seven individuals ascertained from a large congenital cardiovascular malformations cohort. 28807008 2017