Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 861
Gene Symbol: RUNX1
RUNX1
0.100 Biomarker disease BEFREE The App-Runx1 region is critical for birth defects and electrocardiographic dysfunctions observed in a Down syndrome mouse model. 22693452 2012
Entrez Id: 351
Gene Symbol: APP
APP
0.100 Biomarker disease BEFREE We and others have shown that APP C99, the major beta-secretase product, and Abeta are markedly increased in DS. 16816112 2006
Entrez Id: 351
Gene Symbol: APP
APP
0.100 Biomarker disease BEFREE Moreover, DS fibroblasts and Alzheimer disease cortex also show overexpression of Notch1 and Dll1, indicating that enhanced beta-APP processing found in both DS and AD could be instrumental in these changes. 16126912 2005
Entrez Id: 351
Gene Symbol: APP
APP
0.100 Biomarker disease BEFREE Elimination of amyloid precursor protein in senile plaques in the brain of a patient with Alzheimer-type dementia and Down syndrome. 30086988 2019
Entrez Id: 2078
Gene Symbol: ERG
ERG
0.100 Biomarker disease BEFREE This study focused on the clinical application value of ERG methylation level in blood of pregnant women as a biomarker in Down's syndrome. 28111453 2017
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.100 GeneticVariation disease BEFREE The combined MTHFR 677TT/MTR 2756AA genotype was associated with increased DS risk (P=0.034), and the combined MTHFR 1298AC/TYMS 2R/2R genotype with reduced risk (P=0.003). 18983896 2009
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.100 GeneticVariation disease BEFREE Finally, statistically significant associations between the MTHFR A1298C and MTRR A66G gene polymorphisms and the risk of DS were not found. 17934692 2007
Entrez Id: 5981
Gene Symbol: RFC1
RFC1
0.100 GeneticVariation disease BEFREE This study aimed to analyze a dataset of genetic and cytogenetic data in an Italian group of MDS and mothers of healthy children (control mothers) to assess the predictive capacity of artificial neural networks assembled in TWIST system in distinguish consistently these two different conditions and to identify the variables expressing the maximal amount of relevant information to the condition of being mother of a DS child.The dataset consisted of the following variables: the frequency of chromosome damage in peripheral lymphocytes (BNMN frequency) and the genotype for 7 common polymorphisms in folate metabolic genes (MTHFR 677C>T and 1298A>C, MTRR 66A>G, MTR 2756A>G, RFC1 80G>A and TYMS 28bp repeats and 1494 6bp deletion). 20868477 2010
Entrez Id: 2623
Gene Symbol: GATA1
GATA1
0.100 GeneticVariation disease BEFREE There is an increased risk of myeloid malignancy in individuals with Down's syndrome (DS), which is associated with a mutation in exon 2 of the transcription factor GATA-1. 17157155 2006
Entrez Id: 6573
Gene Symbol: SLC19A1
SLC19A1
0.100 GeneticVariation disease BEFREE There was no evidence of any association between the RFC1 A80G and TC2 C776G polymorphisms and the maternal risk of DS in the sample evaluated. 19274320 2008
Entrez Id: 351
Gene Symbol: APP
APP
0.100 Biomarker disease BEFREE This may be the case during pathological evolution of AD and DS when beta/A4 derived from synaptic APP is converted to beta/A4 amyloid by radical generation. 8239320 1993
Entrez Id: 6285
Gene Symbol: S100B
S100B
0.100 Biomarker disease BEFREE It is postulated that S-100 b protein may inhibit the development of neuroblastomas in Down's syndrome either antenatally, or after birth and may be a therapeutic agent against neuroblastoma. 8733171 1996
Entrez Id: 875
Gene Symbol: CBS
CBS
0.100 GeneticVariation disease BEFREE A peculiar VNTR in the cystathionine β-synthase gene is a risk factor for Down Syndrome. 26475388 2015
Entrez Id: 6573
Gene Symbol: SLC19A1
SLC19A1
0.100 GeneticVariation disease BEFREE In conclusion, the presence of three or more polymorphic alleles for MTHFR C677T, MTHFR A1298C, MTR A2756G, and RFC1 A80G, and plasma Hcy concentrations higher than 4.99 micromol/L are maternal risk factors for DS. 18273817 2008
Entrez Id: 351
Gene Symbol: APP
APP
0.100 Biomarker disease BEFREE These observations suggest that the development of pathological changes in DS brains does not parallel that observed in AD, which might be attributable to different causes in the pathogenesis of betaA4 formation. 9928821 1999
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.100 AlteredExpression disease BEFREE This suggests that the decreased expression of PRDX2 may contribute to the altered redox state in DS at levels comparable to that of the increased expression of SOD1. 12943237 2003
Entrez Id: 5069
Gene Symbol: PAPPA
PAPPA
0.100 GeneticVariation disease BEFREE Patients were evaluated for risk of Down's syndrome and trisomy 18 based on biochemistry (free beta-human chorionic gonadotropin and pregnancy-associated plasma protein A), nuchal translucency and the combination of both. 9476320 1997
Entrez Id: 2078
Gene Symbol: ERG
ERG
0.100 Biomarker disease BEFREE Aberrant protein expression of transcription factors BACH1 and ERG, both encoded on chromosome 21, in brains of patients with Down syndrome and Alzheimer's disease. 15068237 2003
Entrez Id: 1859
Gene Symbol: DYRK1A
DYRK1A
0.100 AlteredExpression disease BEFREE DYRK1A mRNA also increased in the hippocampus of 5 months old DS mice and it is associated with decreased levels of miR-199b. 31605772 2020
Entrez Id: 1827
Gene Symbol: RCAN1
RCAN1
0.100 Biomarker disease BEFREE We hypothesize that overexpression of three genes, dap160/itsn1, synj/synj1, and nla/dscr1, located on human chromosome 21 play important roles in DS neurons. 19805187 2009
Entrez Id: 6647
Gene Symbol: SOD1
SOD1
0.100 GeneticVariation disease BEFREE These results indicate that the Down syndrome phenotype of this patient is due to microduplication of a chromosome 21 fragment containing the CuZn SOD gene. 2951317 1987
Entrez Id: 2078
Gene Symbol: ERG
ERG
0.100 Biomarker disease BEFREE These data suggest a role for ERG as a regulator of hematopoietic lineage potential, and that trisomy of ERG in the context of DS foetal liver hemopoiesis drives the pre-leukemic changes that predispose to subsequent DS-TMD and DS-AMKL. 25973911 2015
Entrez Id: 5069
Gene Symbol: PAPPA
PAPPA
0.100 Biomarker disease BEFREE Early pregnancy screening with the combined measurement of maternal serum PAPP-A and free beta-hCG and fetal nuchal translucency could achieve a high Down syndrome detection rate. 10360515 1999
Entrez Id: 4548
Gene Symbol: MTR
MTR
0.100 GeneticVariation disease BEFREE The methionine-synthase-reductase A66G, the methionine-synthase A2756G and the cystathionine-beta-synthase 844ins68 polymorphisms were not associated with increased risk of Down syndrome. 16845273 2006
Entrez Id: 102724560
Gene Symbol: CBSL
CBSL
0.100 Biomarker disease BEFREE In clinically relevant AML cell line models, high cystathionine-beta-synthase transcripts in DS CMK cells were accompanied by 10-fold greater ara-C sensitivity and 2.4-fold higher levels of ara-CTP compared with non-DS CMS cells. 14744791 2004