Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6857
Gene Symbol: SYT1
SYT1
0.100 GeneticVariation group BEFREE With this method, 27 tumors (9 synovial sarcomas and 18 nonsynovial sarcomas) were studied and showed SYT-SSX1 rearrangement in 6 cases and SYT-SSX2 in 3 cases. 15747098 2005
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 GeneticVariation group BEFREE Dual-energy spectral CT characteristics in surgically resected lung adenocarcinoma: comparison between Kirsten rat sarcoma viral oncogene mutations and epidermal growth factor receptor mutations. 31783917 2019
Entrez Id: 2521
Gene Symbol: FUS
FUS
0.100 Biomarker group BEFREE Fluorescence in situ hybridization (FISH) studies have shown involvement of the FUS gene in the majority of so-called hybrid LGFMS/SEF and in 10% to 25% of sarcomas with pure SEF morphology. 24441665 2014
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 Biomarker group BEFREE DSRCT thus represents the third primitive sarcoma in which the EWS gene is involved and the first instance of recurrent rearrangement of a tumor suppressor gene, WT1, in a specific tumor type. 8187063 1994
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 GeneticVariation group BEFREE In conclusion, strong nuclear ERG immunoreactivity is specific for Ewing sarcomas with EWSR1-ERG rearrangement. 22766791 2012
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.100 Biomarker group BEFREE The Mdm2 gene is amplified in approximately one-third of human sarcomas and overexpressed in a variety of other human cancers. 14612455 2004
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.100 GeneticVariation group BEFREE In line with this, sarcomas with MDM2-negative rings commonly show complete loss of either CDKN2A or RB1 -both known to be important for genome integrity. 24070870 2014
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.100 GeneticVariation group BEFREE Tumors and matched normal thyroid samples were tested for RAS, for the v-raf murine sarcoma viral oncogene (BRAF) substitution of valine (V) for glutamate (E) at codon 600 (the V600E mutation), for phosphatase and tensin homolog (PTEN), for catalytic PI3k p110 subunit alpha (PIK3CA), for AKT, and for the presence of rearranged during transfection (ret) proto-oncogene/PTC (RET-PTC) and paired box-8 (PAX8)/peroxisome proliferator-activated receptor gamma (PPARgamma) fusion protein (PAX8-PPARgamma) rearrangements by direct sequencing and reverse transcriptase-polymerases chain reaction analyses, respectively. 20564403 2010
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 Biomarker group BEFREE By RT-PCR, fusion transcripts involving CIC (19q13) and DUX4 (4q35) were confirmed to be present in both primitive round cell sarcomas, further defining the breakpoints seen by genomic analysis. 19837261 2009
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression group BEFREE Four affected members of the family with sarcoma or premenopausal breast cancer showed increased expression of p53 protein in their normal tissues as detected by immunohistochemistry. 7981072 1994
Entrez Id: 100288687
Gene Symbol: DUX4
DUX4
0.100 Biomarker group BEFREE In this review we discuss the main categories of undifferentiated round cell sarcoma, in relation to Ewing sarcoma and its molecular variants, with particular emphasis on the genetic and biologic features of recently described entities including desmoplastic small round cell tumor and CIC-DUX4 as well as BCOR-CCNB3-associated round cell sarcomas. 24801613 2014
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker group BEFREE For 64 cases the results were concordant: 56 sarcomas were considered to have wild-type p53 by both techniques. 8821948 1996
Entrez Id: 100288687
Gene Symbol: DUX4
DUX4
0.100 AlteredExpression group BEFREE The CIC-DUX4 fusion transcript is present in a subgroup of pediatric primitive round cell sarcomas. 21813156 2012
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation group BEFREE Because these rare tumors also respond poorly to standard chemotherapy and bear a 50% 5-year mortality rate, we investigated the possible therapeutic benefits of p53 gene restoration in sarcomas. 10766348 2000
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 Biomarker group BEFREE EWSR1-PATZ1 is a rare fusion partnering in sarcoma, with few cases reported in the literature. 31189996 2019
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.100 Biomarker group BEFREE As such the WHO classification temporarily grouped the CIC-rearranged tumors under undifferentiated sarcomas with round cell phenotype, until further clinical evidence was available. 28346326 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation group BEFREE Synonymous mutation in TP53 results in a cryptic splice site affecting its DNA-binding site in an adolescent with two primary sarcomas. 28475293 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation group BEFREE These results support the notion that besides P53 alterations, MDM2 gene deregulation seems to be an important event in sarcomas evolution. 10606188 1999
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 PosttranslationalModification group BEFREE These data are in support of the following tissue-specific processes: in sporadic breast cancer (sarcomas etc.), loss of methylation sites (in 35 codons mostly next to codon 133), might lead to loss of silencing of TP53 isoforms which are suppressed in these tissues. 17505880 2007
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.100 GeneticVariation group BEFREE Fibroblast growth factor receptor (FGFR)3 and phosphatidylinositol‑4,5‑bisphosphate 3‑kinase, catalytic subunit alpha (PIK3CA) mutations are found in various types of cancer, such as urinary bladder cancer, human papillomavirus‑positive tonsillar and base of the tongue squamous cell carcinoma, breast cancer and some childhood sarcomas. 31638167 2019
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.100 Biomarker group BEFREE We compared sensitivity and specificity of p16 IHC to MDM2 and CDK4 IHC in the differential diagnosis of ALT-WDLPS (n=19) versus benign adipocytic tumors (n=44) and DDLPS (n=18) versus mimicking sarcomas (n=20). 27597521 2017
Entrez Id: 4193
Gene Symbol: MDM2
MDM2
0.100 Biomarker group BEFREE MDM2 amplification was observed in 40% of pleomorphic sarcomas and a small subset of high-grade sarcomas (3/63). 18500263 2008
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.100 GeneticVariation group BEFREE KIT and PDGFRA mutations in gastrointestinal stromal tumors) and (ii) sarcomas displaying multiple, complex karyotypic abnormalities with no specific pattern, including leiomyo-sarcoma, and pleomorphic liposarcoma. 20490332 2010
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.100 GeneticVariation group BEFREE A t(11;22)(p13;p12) chromosomal translocation, juxtaposing the Wilms' tumor (WT1) and Ewing's sarcoma (EWS) genes, is the cytogenetic hallmark of desmoplastic small round cell tumor (DSRCT), a primitive multiphenotypic sarcoma arising in serosal tissues. 9071577 1997
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.100 AlteredExpression group BEFREE The morphologic similarity of uterine mesenchymal tumours and GIST, and the presence of KIT protein in normal uterine tissue, suggests that uterine sarcomas may have the same c-kit overexpression. 17367465 2007