Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10993
Gene Symbol: SDS
SDS
0.010 Biomarker disease BEFREE Here, in order to identify biomarker candidates in serum of TNBC patients, these nanomaterials were combined with electrophoretic separation (SDS-PAGE) to performed qualitative and quantitative comparisons of the serum proteomes of TNBC patients (n = 8) and healthy controls (n = 8) by liquid chromatography tandem-mass spectrometry (LC-MS/MS) analysis. 31731051 2020
Entrez Id: 9271
Gene Symbol: PIWIL1
PIWIL1
0.010 Biomarker disease BEFREE The present study investigated breast cancer‑related ncRNAs [microRNA (miR)‑7, ‑9, ‑15a, ‑17, ‑18a, ‑19b, ‑21, ‑30b, ‑222 and ‑320c, PIWI‑interacting RNA‑36743 and GlyCCC2] in triple positive BT‑474 cells and three TNBC cell lines (BT‑20, HS‑578T and MDA‑MB‑231) treated with various chemotherapeutic agents using reverse transcription‑quantitative PCR. 31789396 2020
Entrez Id: 57214
Gene Symbol: CEMIP
CEMIP
0.010 Biomarker disease BEFREE Moreover, survival analysis showed that CEMIP was associated with poor outcome in TNBC. 31846842 2020
Entrez Id: 790
Gene Symbol: CAD
CAD
0.010 Biomarker disease BEFREE CAD-generated kinetic volume parameters may correlate with survival in TNBC patients. 31821036 2020
Entrez Id: 5607
Gene Symbol: MAP2K5
MAP2K5
0.010 Biomarker disease BEFREE Pharmacological inhibition of the MEK5/ERK5 and PI3K/Akt signaling pathways synergistically reduces viability in triple-negative breast cancer. 31464004 2020
Entrez Id: 11118
Gene Symbol: BTN3A2
BTN3A2
0.010 Biomarker disease BEFREE Immune cell subtypes correlation analysis showed that BTN3A2 was highly correlated with general T, CD8+ T, T helper type 1, exhausted T cells, and dendritic cells in TNBC. 31692043 2020
Entrez Id: 7942
Gene Symbol: TFEB
TFEB
0.010 Biomarker disease BEFREE TFEB knockdown decreased the viability of TNBC cells while increasing caspase-3 dependent apoptosis. 31820786 2020
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.010 Biomarker disease BEFREE This yielded robust suppression of the miR-34a target genes CCND-1, Notch-1, Bcl-2, Survivin, and MDR-1, which reduced TNBC cell proliferation and induced cell cycle arrest. 31742868 2020
Entrez Id: 665
Gene Symbol: BNIP3L
BNIP3L
0.010 Biomarker disease BEFREE In our study, ITGB4-overexpressing triple negative breast cancer (TNBC) cells provided cancer-associated fibroblasts (CAFs) with ITGB4 proteins via exosomes, which induced BNIP3L-dependent mitophagy and lactate production in CAFs. 31534187 2020
Entrez Id: 100526767
Gene Symbol: RNF103-CHMP3
RNF103-CHMP3
0.010 AlteredExpression disease BEFREE miR-122-5p promotes aggression and epithelial-mesenchymal transition in triple-negative breast cancer by suppressing charged multivesicular body protein 3 through mitogen-activated protein kinase signaling. 31541468 2020
Entrez Id: 121838
Gene Symbol: NRAD1
NRAD1
0.010 Biomarker disease BEFREE Together, these data identify lncRNA NRAD1 as a downstream effector of ALDH1A3, and a target for TNBCs and CSCs, with functions in cell survival and regulation of gene expression. 31197235 2020
Entrez Id: 406906
Gene Symbol: MIR122
MIR122
0.010 Biomarker disease BEFREE In our experiments, miR-122-5p was significantly upregulated and CHMP3 gene was significantly downregulated in TNBC cells compared with normal cell line. miR-122-5p mimics enhanced TNBC cell viability, proliferation, and invasion whereas the upregulation of CHMP3 gene led to an opposite outcome. 31541468 2020
Entrez Id: 7879
Gene Symbol: RAB7A
RAB7A
0.010 Biomarker disease BEFREE SIGNIFICANCE: These findings identify Rab7 as a substrate for TBK1 for regulation of innate immune signaling, thereby providing important insight for strategies aimed at manipulating the immune response to enhance therapeutic efficacy in TNBC. 31662325 2020
Entrez Id: 100616258
Gene Symbol: MIR4516
MIR4516
0.010 Biomarker disease BEFREE Our results show that the loss of miR-4516 from CAF-derived exosomes is associated with FOSL1-dependent TNBC progression and suggest that miR-4516 can be used as an anti-cancer drug for TNBC. 31672492 2020
Entrez Id: 8048
Gene Symbol: CSRP3
CSRP3
0.010 Biomarker disease BEFREE The current study aims to determine the effect of CLP on migration and growth of triple negative breast cancer cell lines. 31669320 2020
Entrez Id: 2215
Gene Symbol: FCGR3B
FCGR3B
0.010 Biomarker disease BEFREE Crosslinking of CD32A<sup>131R</sup> -CR on T cells by cetuximab or panitumumab and CD16<sup>158F</sup> -CR T cells by cetuximab induced elimination of triple negative breast cancer (TNBC) MDA-MB-468 cells, and the secretion of interferon gamma and tumor necrosis factor alpha. 31479522 2020
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.010 Biomarker disease BEFREE TACI silencing can be a new and promising therapeutic target for mesenchymal-stem like triple-negative breast cancer subtype. 31400636 2020
Entrez Id: 143689
Gene Symbol: PIWIL4
PIWIL4
0.010 Biomarker disease BEFREE The present study investigated breast cancer‑related ncRNAs [microRNA (miR)‑7, ‑9, ‑15a, ‑17, ‑18a, ‑19b, ‑21, ‑30b, ‑222 and ‑320c, PIWI‑interacting RNA‑36743 and GlyCCC2] in triple positive BT‑474 cells and three TNBC cell lines (BT‑20, HS‑578T and MDA‑MB‑231) treated with various chemotherapeutic agents using reverse transcription‑quantitative PCR. 31789396 2020
Entrez Id: 29968
Gene Symbol: PSAT1
PSAT1
0.010 Biomarker disease BEFREE In addition, suppression of PSAT1 inhibits motility and migration in these TNBC cell lines, which is not recapitulated upon loss of PHGDH. 31630284 2020
Entrez Id: 7320
Gene Symbol: UBE2B
UBE2B
0.010 Biomarker disease BEFREE These RAD6B activities are unaffected by BRCA1 status of TNBCs suggesting that the RAD6B function in TLS/FA crosstalk could occur in HR-dependent and independent modes. 31639439 2020
Entrez Id: 23406
Gene Symbol: COTL1
COTL1
0.010 Biomarker disease BEFREE The current study aims to determine the effect of CLP on migration and growth of triple negative breast cancer cell lines. 31669320 2020
Entrez Id: 619552
Gene Symbol: MIR483
MIR483
0.010 AlteredExpression disease BEFREE Our data showed significant downregulation of miR-483-3p expression in TNBC clinical and cell line samples. 31508813 2020
Entrez Id: 4017
Gene Symbol: LOXL2
LOXL2
0.010 Biomarker disease BEFREE We find that LOXL2 and H3K4ox are higher in triple-negative breast cancer (TNBC) cell lines and patient-derived xenografts (PDXs) than those from other breast cancer subtypes. 31462706 2020
Entrez Id: 151393
Gene Symbol: RMDN2
RMDN2
0.010 Biomarker disease BEFREE We identified a four-biomarker signature based on miR-221, miR-1305, miR-4708, and RMDN2 expression levels that allowed for the subdivision of TNBC into high- or low-risk groups (Hazard Ratio - HR=0.32; 95% Confidence Interval - CI = 0.11-0.91; p=0.03) and are also statistically associated with survival outcome in subgroups of postmenopausal status (HR=0.19; 95%CI = 0.04-0.90; p=0.016), node negative status (HR=0.12; 95%CI = 0.01-1.04; p=0.026), and tumors larger than 2cm (HR=0.21; 95%CI = 0.05-0.81; p=0.021). 31487369 2020
Entrez Id: 406914
Gene Symbol: MIR127
MIR127
0.010 Biomarker disease BEFREE In conclusion, our study demonstrates that miR-127 functions as a tumor and metastasis suppressor in triple-negative breast cancer and that delivery of miR-127 may hold promise as a novel therapy. 31694904 2020