Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.100 Biomarker disease BEFREE Estrogen receptor (ER)-negative breast cancer is heterogeneous, and the biology of this disease has remained poorly understood. 21403841 2011
Entrez Id: 1588
Gene Symbol: CYP19A1
CYP19A1
0.100 Biomarker disease BEFREE Aromatase inhibitors (AIs) have become the front-line choice for treatment of ER+ breast cancer. 21420993 2011
Entrez Id: 1588
Gene Symbol: CYP19A1
CYP19A1
0.100 Biomarker disease BEFREE Aromatase inhibitors (AI) have improved the treatment of oestrogen receptor positive (ER+) breast cancer. 21477608 2011
Entrez Id: 4781
Gene Symbol: NFIB
NFIB
0.010 AlteredExpression disease BEFREE NFIB protein was upregulated in ER negative breast cancer tissues but the expression level was similar between HER2 subtype and triple negative subtype. 21925980 2011
Entrez Id: 2950
Gene Symbol: GSTP1
GSTP1
0.020 AlteredExpression disease BEFREE GSTP1 expression predicts poor pathological complete response to neoadjuvant chemotherapy in ER-negative breast cancer. 22320227 2012
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.050 Biomarker disease BEFREE Insulin-like growth factor 1 attenuates antiestrogen- and antiprogestin-induced apoptosis in ER+ breast cancer cells by MEK1 regulation of the BH3-only pro-apoptotic protein Bim. 22429491 2012
Entrez Id: 8000
Gene Symbol: PSCA
PSCA
0.010 GeneticVariation disease BEFREE Prostate stem cell antigen single nucleotide polymorphisms influence risk of estrogen receptor negative breast cancer in Korean females. 22502712 2012
Entrez Id: 5304
Gene Symbol: PIP
PIP
0.010 Biomarker disease BEFREE Prolactin-induced protein mediates cell invasion and regulates integrin signaling in estrogen receptor-negative breast cancer. 22817771 2012
Entrez Id: 6489
Gene Symbol: ST8SIA1
ST8SIA1
0.030 AlteredExpression disease BEFREE ST8Sia I together with b- and c-series gangliosides are also over-expressed in neuroectoderm-derived malignant tumors such as melanoma, glioblastoma, neuroblastoma and in estrogen receptor (ER) negative breast cancer, where they play a role in cell proliferation, migration, adhesion and angiogenesis. 22885356 2012
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.020 GeneticVariation disease BEFREE FGFR2 rs2981582 was confirmed to be significantly associated with the risk of ER-positive but not ER-negative breast cancer. 23143756 2013
Entrez Id: 2494
Gene Symbol: NR5A2
NR5A2
0.010 AlteredExpression disease BEFREE LRH-1 transcript levels were significantly higher in ER+ versus ER- breast cancer cells lines; however LRH-1 protein was expressed at similar levels. 23911789 2013
Entrez Id: 5026
Gene Symbol: P2RX5
P2RX5
0.010 AlteredExpression disease BEFREE LRH-1 transcript levels were significantly higher in ER+ versus ER- breast cancer cells lines; however LRH-1 protein was expressed at similar levels. 23911789 2013
Entrez Id: 6241
Gene Symbol: RRM2
RRM2
0.010 Biomarker disease BEFREE RRM2 appears to be a promising prognostic biomarker and therapeutic target for ER-negative breast cancer patients. 25213022 2014
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.020 Biomarker disease BEFREE Signal transducer and activator of transcription 3 (STAT3) has been linked to breast cancer progression and here we investigate the mechanism of leptin-induced STAT3 activation in ER-negative breast cancer. 25481644 2015
Entrez Id: 3952
Gene Symbol: LEP
LEP
0.030 AlteredExpression disease BEFREE Leptin induces SK1 expression and activation in ER-negative breast cancer cell lines MDAMB-231 and BT-549, but not in ER-positive cell lines. 25482303 2014
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.100 Biomarker disease BEFREE Estrogen receptor-positive (ER+) breast cancer cells were treated ±P7170. 25491778 2015
Entrez Id: 7048
Gene Symbol: TGFBR2
TGFBR2
0.010 GeneticVariation disease BEFREE TGFBR2 variants may have prognostic and predictive value in ER-negative breast cancer patients treated with adjuvant chemotherapy. 25849327 2015
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.100 Biomarker disease BEFREE Estrogen receptor (ER)-negative breast cancer cells are more resistant to RA than ER-positive cells. 26142905 2015
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.010 Biomarker disease BEFREE PTEN insufficiency modulates ER+ breast cancer cell cycle progression and increases cell growth in vitro and in vivo. 26316702 2015
Entrez Id: 1727
Gene Symbol: CYB5R3
CYB5R3
0.010 Biomarker disease BEFREE NADH-Cytochrome b5 Reductase 3 Promotes Colonization and Metastasis Formation and Is a Prognostic Marker of Disease-Free and Overall Survival in Estrogen Receptor-Negative Breast Cancer. 26351264 2015
Entrez Id: 2305
Gene Symbol: FOXM1
FOXM1
0.020 Biomarker disease BEFREE FOXM1 is a key transcription factor regulating cell cycle progression, DNA damage response, and a host of other hallmark cancer features, but the role of the FOXM1 cistrome in driving estrogen receptor-positive (ER+) versus estrogen receptor-negative (ER-) breast cancer clinical outcomes remains undefined. 26456572 2015
Entrez Id: 1588
Gene Symbol: CYP19A1
CYP19A1
0.100 Biomarker disease BEFREE Aromatase inhibitors (AI), either alone or together with chemotherapy, have become the standard adjuvant treatment for postmenopausal, estrogen receptor-positive (ER+) breast cancer. 26585578 2015
Entrez Id: 7033
Gene Symbol: TFF3
TFF3
0.020 Biomarker disease BEFREE TFF3, which encodes for trefoil factor 3 and is an estrogen-responsive oncogene shown to play a functional role in tamoxifen resistance and metastasis of ER+ breast cancer, was also shown to be upregulated in an AI-resistant cell line model, and reduction of TFF3 levels using TFF3-specific siRNAs decreased the growth of both the AI-resistant and -sensitive parental cell lines. 26585578 2015
Entrez Id: 406947
Gene Symbol: MIR155
MIR155
0.010 Biomarker disease BEFREE miR-155 Drives Metabolic Reprogramming of ER+ Breast Cancer Cells Following Long-Term Estrogen Deprivation and Predicts Clinical Response to Aromatase Inhibitors. 26795347 2016
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.100 Biomarker disease BEFREE Estrogen Receptor Binding (18F-FES PET) and Glycolytic Activity (18F-FDG PET) Predict Progression-Free Survival on Endocrine Therapy in Patients with ER+ Breast Cancer. 27342400 2017