Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs143332484
rs143332484
TREM2 ; LOC105375056
1 1.000 0.080 6 41161469 missense variant C/A;T snv 7.6E-03 0.740 0.800 5 2015 2019
dbSNP: rs2234255
rs2234255
TREM2 ; TREML1 ; LOC105375056
1 1.000 0.080 6 41159805 missense variant G/A snv 4.9E-03 1.8E-03 0.050 1.000 5 2016 2019
dbSNP: rs9271192
rs9271192 		1 1.000 0.080 6 32610753 intergenic variant C/A snv 0.74 0.810 1.000 5 2013 2019
dbSNP: rs1366541089
rs1366541089
CTSD
1 1.000 0.080 11 1754930 missense variant G/A snv 7.0E-06 0.040 0.500 4 2004 2015
dbSNP: rs2282649
rs2282649
SORL1
1 1.000 0.080 11 121608249 non coding transcript exon variant C/T snv 0.27 0.040 1.000 4 2009 2019
dbSNP: rs405697
rs405697
TOMM40
1 1.000 0.080 19 44901434 3 prime UTR variant A/G;T snv 0.800 1.000 4 2011 2019
dbSNP: rs7254776
rs7254776
LOC107985305
1 1.000 0.080 19 44724478 intron variant T/C;G snv 0.800 1.000 4 2009 2018
dbSNP: rs7920721
rs7920721
LOC105376412 ; LOC105376413
1 1.000 0.080 10 11678309 upstream gene variant A/G snv 0.31 0.810 1.000 4 2013 2019
dbSNP: rs10793294
rs10793294
GAB2
1 1.000 0.080 11 78285357 intron variant C/A;G snv 0.710 1.000 3 2007 2011
dbSNP: rs10948363
rs10948363
CD2AP
1 1.000 0.080 6 47520026 intron variant A/G snv 0.23 0.800 1.000 3 2013 2019
dbSNP: rs115550680
rs115550680
ABCA7
1 1.000 0.080 19 1050421 intron variant A/G snv 1.7E-02 0.830 0.667 3 2013 2019
dbSNP: rs1303864231
rs1303864231
NANOG
1 1.000 0.080 12 7789754 missense variant A/G snv 4.0E-06 4.9E-05 0.030 1.000 3 2016 2018
dbSNP: rs17643262
rs17643262
MARK4 ; PPP1R37
1 1.000 0.080 19 45128558 intron variant G/A snv 9.9E-02 0.800 1.000 3 2011 2018
dbSNP: rs2177369
rs2177369
CHAT
1 1.000 0.080 10 49635683 intron variant G/A snv 0.31 0.030 1.000 3 2016 2016
dbSNP: rs2927480
rs2927480 		1 1.000 0.080 19 44834128 intergenic variant G/C snv 0.27 0.700 1.000 3 2009 2012
dbSNP: rs2965109
rs2965109
LOC107985305
1 1.000 0.080 19 44722081 intron variant C/T snv 0.41 0.700 1.000 3 2009 2012
dbSNP: rs3745150
rs3745150
NECTIN2
1 1.000 0.080 19 44882502 intron variant G/C snv 0.35 0.700 1.000 3 2009 2012
dbSNP: rs3852861
rs3852861
NECTIN2
1 1.000 0.080 19 44879804 intron variant G/T snv 0.41 0.700 1.000 3 2011 2014
dbSNP: rs4900442
rs4900442
CYP46A1
1 1.000 0.080 14 99691904 intron variant C/T snv 0.47 0.43 0.030 0.667 3 2006 2016
dbSNP: rs668387
rs668387
SORL1
1 1.000 0.080 11 121497212 intron variant C/A;T snv 0.030 1.000 3 2009 2016
dbSNP: rs6701713
rs6701713
CR1
1 1.000 0.080 1 207612944 intron variant A/G;T snv 0.810 1.000 3 2011 2018
dbSNP: rs7225151
rs7225151
SCIMP ; LOC100130950
1 1.000 0.080 17 5233752 intron variant G/A snv 0.15 0.800 1.000 3 2013 2019
dbSNP: rs7359852
rs7359852 		1 1.000 0.080 19 44832778 intergenic variant T/C snv 0.31 0.700 1.000 3 2009 2012
dbSNP: rs983392
rs983392 		1 1.000 0.080 11 60156035 downstream gene variant A/G snv 0.28 0.800 1.000 3 2013 2019
dbSNP: rs10405693
rs10405693 		1 1.000 0.080 19 44823407 downstream gene variant C/T snv 0.28 0.800 1.000 2 2014 2019