Gene: HLA-DQA1 ×
Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9272346
rs9272346
HLA-DQA1
8 0.790 0.320 6 32636595 intron variant G/A snv 0.54 0.810 1.000 4 2012 2019
dbSNP: rs17843604
rs17843604
HLA-DQA1
2 0.925 0.120 6 32652506 intergenic variant C/T snv 0.49 0.800 1.000 2 2010 2019
dbSNP: rs146668528
rs146668528
HLA-DQA1
2 1.000 0.080 6 32630251 intron variant C/T snv 5.7E-02 0.700 1.000 1 2018 2018
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
20 0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 0.700 1.000 1 2011 2011
dbSNP: rs28383364
rs28383364
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.080 6 32639135 3 prime UTR variant A/G snv 0.11 0.700 1.000 1 2019 2019
dbSNP: rs28383454
rs28383454
HLA-DQA1 ; LOC107986589
1 1.000 0.080 6 32641593 intron variant G/C;T snv 3.2E-03 0.700 1.000 1 2019 2019
dbSNP: rs28798705
rs28798705
HLA-DQA1
1 1.000 0.080 6 32650032 downstream gene variant A/G snv 0.66 0.700 1.000 1 2019 2019
dbSNP: rs3104367
rs3104367
HLA-DQA1
1 1.000 0.080 6 32635710 intron variant T/C snv 0.57 0.700 1.000 1 2016 2016
dbSNP: rs9273123
rs9273123
HLA-DQA1
1 1.000 0.080 6 32644956 non coding transcript exon variant G/A snv 0.46 0.700 1.000 1 2019 2019