Source: GWASDB ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2066845
rs2066845
NOD2
1 0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 1.000 0.949 3 2001 2019
dbSNP: rs2066844
rs2066844
NOD2
1 0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 1.000 0.940 2 2001 2018
dbSNP: rs11209026
rs11209026
IL23R
5 0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 0.900 0.944 8 2006 2020
dbSNP: rs2241880
rs2241880
ATG16L1 ; SCARNA5
1 0.627 0.600 2 233274722 missense variant A/G snv 0.45 0.44 0.900 0.961 4 2007 2020
dbSNP: rs2066847
rs2066847
NOD2
2 0.716 0.400 16 50729868 frameshift variant C/-;CC delins 1.5E-02 0.890 0.923 4 2005 2019
dbSNP: rs2542151
rs2542151 		6 0.763 0.480 18 12779948 upstream gene variant G/T snv 0.83 0.880 1.000 4 2007 2016
dbSNP: rs7517847
rs7517847
IL23R ; C1orf141
2 0.689 0.600 1 67215986 intron variant T/G snv 0.37 0.880 1.000 1 2007 2019
dbSNP: rs744166
rs744166
STAT3
3 0.689 0.560 17 42362183 intron variant A/G snv 0.48 0.870 1.000 1 2008 2016
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
13 0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 0.860 0.800 2 2005 2016
dbSNP: rs1004819
rs1004819
IL23R ; C1orf141
1 0.776 0.360 1 67204530 intron variant G/A snv 0.30 0.860 1.000 1 2006 2019
dbSNP: rs1893217
rs1893217
PTPN2
8 0.742 0.440 18 12809341 intron variant A/G snv 0.12 0.850 1.000 3 2008 2016
dbSNP: rs10758669
rs10758669 		5 0.763 0.280 9 4981602 upstream gene variant C/A;T snv 0.850 1.000 2 2008 2016
dbSNP: rs10889677
rs10889677
IL23R
2 0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 0.850 1.000 2 2006 2020
dbSNP: rs13361189
rs13361189 		1 0.752 0.240 5 150843825 upstream gene variant T/C snv 0.21 0.850 1.000 2 2007 2015
dbSNP: rs2201841
rs2201841
IL23R ; C1orf141
4 0.716 0.440 1 67228519 intron variant A/G;T snv 0.850 1.000 2 2006 2013
dbSNP: rs3810936
rs3810936
TNFSF15
1 0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75 0.850 1.000 2 2005 2018
dbSNP: rs3024505
rs3024505 		6 0.790 0.320 1 206766559 upstream gene variant G/A snv 0.11 0.850 0.875 1 2008 2017
dbSNP: rs76418789
rs76418789
IL23R ; C1orf141
1 0.882 0.080 1 67182913 missense variant G/A snv 7.3E-03 4.5E-03 0.850 1.000 1 2011 2019
dbSNP: rs1000113
rs1000113
IRGM
1 0.925 0.040 5 150860514 intron variant C/T snv 0.13 0.840 1.000 1 2007 2015
dbSNP: rs7848647
rs7848647
TNFSF15
1 0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74 0.840 1.000 1 2005 2018
dbSNP: rs2076756
rs2076756
NOD2
2 0.882 0.040 16 50722970 intron variant A/G snv 0.17 0.830 1.000 6 2007 2019
dbSNP: rs5743293
rs5743293
NOD2
2 0.807 0.200 16 50729868 frameshift variant C/-;CC delins 0.830 1.000 4 2007 2017
dbSNP: rs6478109
rs6478109
TNFSF15
2 0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74 0.830 1.000 3 2005 2016
dbSNP: rs10883365
rs10883365
LINC01475
1 0.882 0.080 10 99528007 non coding transcript exon variant G/A snv 0.52 0.830 1.000 2 2007 2014
dbSNP: rs3197999
rs3197999
APEH ; MST1
6 0.732 0.280 3 49684099 missense variant G/A snv 0.26 0.27 0.830 1.000 2 2008 2017