Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1555979575
rs1555979575
CLDN2 ; MORC4
2 1.000 0.040 X 106928709 missense variant G/C snv 0.700 0
dbSNP: rs1569167515
rs1569167515
POLR2F ; SOX10
4 0.925 0.200 22 37973567 inframe deletion CTGGGGTCAGAGATG/- delins 0.700 0
dbSNP: rs200750564
rs200750564
HOXD13
6 0.827 0.160 2 176094518 stop gained C/T snv 8.0E-06 7.0E-06 0.700 0
dbSNP: rs864309485
rs864309485
TEX15
2 1.000 8 30846888 stop gained A/C snv 0.700 0
dbSNP: rs141425171
rs141425171
AR
3 1.000 0.160 X 67717574 missense variant A/G;T snv 2.2E-05; 5.5E-06 0.010 1.000 1 2001 2001
dbSNP: rs1217691063
rs1217691063
MTHFR
614 0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 0.100 0.926 27 2003 2019
dbSNP: rs2066853
rs2066853
AHR
34 0.653 0.600 7 17339486 missense variant G/A snv 0.15 0.22 0.040 0.750 4 2004 2019
dbSNP: rs2292596
rs2292596
AHRR
7 0.827 0.240 5 422840 missense variant C/G;T snv 0.38; 4.0E-06 0.020 1.000 2 2004 2019
dbSNP: rs140027779
rs140027779
BOLL
1 2 197756444 missense variant T/C snv 8.0E-06 7.0E-06 0.010 1.000 1 2004 2004
dbSNP: rs372015936
rs372015936
BOLL
1 2 197743089 missense variant G/A;C snv 4.1E-05; 4.1E-06 0.010 1.000 1 2004 2004
dbSNP: rs397507444
rs397507444
MTHFR
306 0.405 0.880 1 11794407 missense variant T/G snv 0.100 0.688 16 2005 2019
dbSNP: rs121965059
rs121965059
OAT
4 0.925 0.080 10 124403892 missense variant G/A snv 1.6E-05 7.0E-06 0.020 1.000 2 2005 2015
dbSNP: rs1805087
rs1805087
MTR
135 0.496 0.800 1 236885200 missense variant A/G snv 0.20 0.21 0.060 0.833 6 2006 2017
dbSNP: rs1799945
rs1799945
HFE ; LOC108783645
226 0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 0.020 0.500 2 2006 2012
dbSNP: rs1800562
rs1800562
HFE ; LOC108783645
262 0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 0.020 0.500 2 2006 2012
dbSNP: rs144848
rs144848
BRCA2
29 0.653 0.440 13 32332592 missense variant A/C snv 0.28 0.23 0.010 1.000 1 2006 2006
dbSNP: rs3819392
rs3819392
KIT
2 1.000 0.040 4 54660528 intron variant G/A snv 0.28 0.010 1.000 1 2006 2006
dbSNP: rs1391383394
rs1391383394
DNMT3B
1 20 32791692 missense variant T/C snv 7.0E-06 0.010 1.000 1 2007 2007
dbSNP: rs3750075
rs3750075
FKBP6 ; TRIM50
1 7 73329400 missense variant C/A;T snv 2.4E-03 8.7E-04 0.010 1.000 1 2007 2007
dbSNP: rs6523
rs6523
INSL3
4 0.882 0.200 19 17821329 missense variant T/C snv 0.65 0.70 0.010 1.000 1 2007 2007
dbSNP: rs1799983
rs1799983
NOS3
246 0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 0.060 0.833 6 2008 2017
dbSNP: rs1262199907
rs1262199907
AR
2 1.000 0.160 X 67685960 missense variant C/T snv 5.5E-06 9.5E-06 0.010 1.000 1 2008 2008
dbSNP: rs139524801
rs139524801
AR
3 0.925 0.160 X 67643283 missense variant G/A;T snv 1.8E-04 0.010 1.000 1 2008 2008
dbSNP: rs200390780
rs200390780
AR
2 1.000 0.160 X 67546570 missense variant C/T snv 1.5E-03 1.1E-03 0.010 1.000 1 2008 2008
dbSNP: rs35397110
rs35397110
USP26
2 X 133027131 missense variant G/A;T snv 3.8E-02 0.010 < 0.001 1 2008 2008