Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs80358807
rs80358807
BRCA2
10 0.763 0.280 13 32340146 stop gained C/T snv 0.700 0
dbSNP: rs80358814
rs80358814
BRCA2
12 0.742 0.440 13 32340212 stop gained G/T snv 8.0E-06 0.700 0
dbSNP: rs80358893
rs80358893
BRCA2
10 0.763 0.320 13 32341011 stop gained C/G snv 0.700 0
dbSNP: rs80358920
rs80358920
BRCA2
14 0.732 0.400 13 32346841 stop gained C/G;T snv 0.700 0
dbSNP: rs80358972
rs80358972
BRCA2
12 0.742 0.480 13 32356472 stop gained C/A;T snv 8.0E-06; 3.2E-05 0.700 0
dbSNP: rs80359014
rs80359014
BRCA2
10 0.763 0.320 13 32362596 missense variant A/G;T snv 0.700 0
dbSNP: rs80359031
rs80359031
BRCA2
10 0.763 0.320 13 32363190 missense variant A/T snv 0.700 0
dbSNP: rs80359200
rs80359200
BRCA2
12 0.752 0.320 13 32394726 stop gained C/A;G snv 8.0E-06 0.700 0
dbSNP: rs80359212
rs80359212
BRCA2
11 0.763 0.320 13 32394814 stop gained C/T snv 1.2E-05 4.2E-05 0.700 0
dbSNP: rs80359604
rs80359604
BRCA2
10 0.763 0.320 13 32329468 frameshift variant GT/- delins 0.700 0
dbSNP: rs863224925
rs863224925
ACTR1A ; SUFU
1 1.000 0.040 10 102504263 frameshift variant C/- del 0.700 0
dbSNP: rs1291513037
rs1291513037
APC
1 1.000 0.040 5 112839481 missense variant C/T snv 4.0E-06 0.700 1.000 1 2000 2000
dbSNP: rs878853445
rs878853445
APC
1 1.000 0.040 5 112840008 missense variant G/A snv 8.0E-06 0.700 1.000 1 2000 2000
dbSNP: rs1057517558
rs1057517558
APC
3 0.882 0.120 5 112839549 frameshift variant C/- delins 0.010 1.000 1 2001 2001
dbSNP: rs1801166
rs1801166
APC
17 0.732 0.200 5 112839543 missense variant G/C snv 4.4E-03 5.6E-03 0.010 1.000 1 2001 2001
dbSNP: rs78380192
rs78380192
PAF1 ; MED29
1 1.000 0.040 19 39391457 missense variant C/T snv 0.010 1.000 1 2001 2001
dbSNP: rs80358638
rs80358638
BRCA2
9 0.776 0.280 13 32338277 stop gained G/A;T snv 5.6E-05 0.010 1.000 1 2003 2003
dbSNP: rs1333957805
rs1333957805
CXCR4
1 1.000 0.040 2 136115639 missense variant C/T snv 0.010 1.000 1 2005 2005
dbSNP: rs139209450
rs139209450
AXIN2
1 1.000 0.040 17 65535650 missense variant G/A snv 1.0E-03 3.0E-04 0.010 1.000 1 2007 2007
dbSNP: rs387906238
rs387906238
APC
2 0.925 0.120 5 112819224 frameshift variant AA/- del 0.010 1.000 1 2007 2007
dbSNP: rs749846538
rs749846538
AXIN2
1 1.000 0.040 17 65537814 missense variant C/T snv 6.7E-05 4.2E-05 0.010 1.000 1 2007 2007
dbSNP: rs1801516
rs1801516
ATM
39 0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 0.010 1.000 1 2008 2008
dbSNP: rs143277125
rs143277125
PMS2
6 0.851 0.160 7 5992012 stop gained G/A;T snv 4.0E-06 0.010 1.000 1 2009 2009
dbSNP: rs63750451
rs63750451
PMS2
7 0.827 0.160 7 5986883 stop gained G/A;C snv 1.6E-05 0.010 1.000 1 2009 2009
dbSNP: rs755103500
rs755103500
PTCH1
4 0.851 0.160 9 95516820 start lost T/C;G snv 8.4E-06; 4.2E-06 0.010 1.000 1 2009 2009