Gene: PMS2 ×
Source: CLINVAR ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs121434629
rs121434629
PMS2
12 0.763 0.320 7 6005918 missense variant C/A;T snv 1.6E-04; 8.1E-06 0.700 1.000 26 2004 2018
dbSNP: rs63750871
rs63750871
PMS2
5 0.882 0.200 7 6002590 stop gained G/A snv 4.0E-06 7.0E-06 0.700 1.000 15 1995 2016
dbSNP: rs587779338
rs587779338
PMS2
3 0.851 0.200 7 5977589 missense variant G/A snv 1.0E-05 2.1E-05 0.700 1.000 10 2010 2018
dbSNP: rs267608150
rs267608150
PMS2
7 0.851 0.320 7 5997388 stop gained AGGGGG/CTTCACAAC;CTTCACACACA;NNNNNNNNNNN delins 0.700 1.000 8 2006 2017
dbSNP: rs267608161
rs267608161
PMS2
4 0.851 0.200 7 5982885 missense variant C/T snv 4.0E-05 2.8E-05 0.700 1.000 8 1997 2017
dbSNP: rs587779337
rs587779337
PMS2
1 1.000 0.160 7 5978622 missense variant C/A;T snv 8.0E-06; 4.0E-06 0.700 1.000 8 2008 2017
dbSNP: rs587779343
rs587779343
PMS2
3 1.000 0.160 7 5999116 stop gained G/A;C snv 8.0E-06; 4.0E-06 0.700 1.000 8 2009 2017
dbSNP: rs587779333
rs587779333
PMS2 ; AIMP2
5 0.851 0.200 7 6009019 start lost T/A;C;G snv 4.0E-06; 2.8E-05 0.700 1.000 7 2008 2016
dbSNP: rs63750250
rs63750250
PMS2
9 0.807 0.280 7 5986933 frameshift variant -/T delins 1.6E-05 4.2E-05 0.700 1.000 7 2005 2016
dbSNP: rs587779340
rs587779340
PMS2
7 0.882 0.200 7 6003794 splice acceptor variant T/A;C;G snv 4.1E-06 0.700 1.000 6 2008 2015
dbSNP: rs63751422
rs63751422
PMS2
7 0.882 0.280 7 5986838 stop gained G/A snv 4.0E-06 7.0E-06 0.700 1.000 6 2005 2016
dbSNP: rs188006077
rs188006077
PMS2
1 1.000 0.160 7 6003724 missense variant G/A snv 1.3E-05 0.700 1.000 5 2015 2017
dbSNP: rs200640585
rs200640585
PMS2
5 0.790 0.280 7 5992018 stop gained G/A snv 1.6E-05 1.4E-05 0.700 1.000 5 2010 2016
dbSNP: rs267608153
rs267608153
PMS2
4 0.925 0.160 7 5995534 missense variant C/A;T snv 4.0E-06; 1.2E-05 0.700 1.000 5 2008 2015
dbSNP: rs587780059
rs587780059
PMS2 ; AIMP2
5 0.882 0.200 7 6009018 start lost A/C;G;T snv 4.0E-06; 4.0E-06; 8.0E-06 0.700 1.000 5 2008 2017
dbSNP: rs587780064
rs587780064
PMS2
2 7 5989956 splice acceptor variant C/A snv 4.1E-06 0.700 1.000 5 2009 2015
dbSNP: rs587781716
rs587781716
PMS2
3 1.000 0.160 7 6003718 frameshift variant C/-;CC delins 0.700 1.000 5 2010 2017
dbSNP: rs63750490
rs63750490
PMS2
3 1.000 0.160 7 5986925 stop gained T/A snv 0.700 1.000 5 2008 2016
dbSNP: rs876659736
rs876659736
PMS2
4 0.925 0.200 7 5995612 missense variant T/A;C snv 8.0E-06 0.700 1.000 5 2011 2016
dbSNP: rs143277125
rs143277125
PMS2
3 0.851 0.160 7 5992012 stop gained G/A;T snv 4.0E-06 0.700 1.000 4 2008 2011
dbSNP: rs267608172
rs267608172
PMS2
4 0.925 0.160 7 5982823 splice donor variant C/A;G;T snv 4.1E-06; 1.6E-05 0.700 1.000 4 2008 2016
dbSNP: rs587780062
rs587780062
PMS2
4 0.827 0.240 7 5995614 stop gained G/A;C snv 8.0E-06; 8.0E-05 0.700 1.000 4 2013 2017
dbSNP: rs63750451
rs63750451
PMS2
4 0.827 0.160 7 5986883 stop gained G/A;C snv 1.6E-05 0.700 1.000 4 2006 2016
dbSNP: rs778531080
rs778531080
PMS2
1 7 5986784 stop gained C/A;T snv 1.6E-05 0.700 1.000 4 2010 2015
dbSNP: rs863224676
rs863224676
PMS2
1 7 6005924 inframe deletion TACTAACTC/- delins 0.700 1.000 4 1999 2015