Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1800872
rs1800872
IL10 ; IL19
119 0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69 0.010 1.000 1 2020 2020
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
121 0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 0.020 0.500 2 2011 2019
dbSNP: rs361525
rs361525
TNF
62 0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 0.010 1.000 1 2019 2019
dbSNP: rs4073
rs4073
CXCL8
64 0.566 0.800 4 73740307 upstream gene variant A/T snv 0.46 0.010 1.000 1 2019 2019
dbSNP: rs28362491
rs28362491
NFKB1 ; LOC105377621
56 0.592 0.720 4 102500998 non coding transcript exon variant ATTG/- delins 0.010 1.000 1 2019 2019
dbSNP: rs5742909
rs5742909
CTLA4
40 0.614 0.680 2 203867624 upstream gene variant C/T snv 6.7E-02 0.010 1.000 1 2017 2017
dbSNP: rs1800587
rs1800587
IL1A
43 0.620 0.720 2 112785383 upstream gene variant G/A;C snv 0.32 0.010 1.000 1 2019 2019
dbSNP: rs1129055
rs1129055
CD86
15 0.724 0.400 3 122119472 missense variant G/A snv 0.30 0.25 0.010 1.000 1 2017 2017
dbSNP: rs2516049
rs2516049
HLA-DRB1
12 0.742 0.400 6 32602623 intergenic variant T/C snv 0.27 0.700 1.000 1 2012 2012
dbSNP: rs2071286
rs2071286
NOTCH4
12 0.752 0.280 6 32212119 intron variant C/T snv 0.17 0.700 1.000 1 2012 2012
dbSNP: rs660895
rs660895
HLA-DRB1
10 0.752 0.360 6 32609603 intergenic variant A/G snv 0.19 0.700 1.000 1 2012 2012
dbSNP: rs9275312
rs9275312 		6 0.807 0.280 6 32697951 intergenic variant A/G snv 0.16 0.700 1.000 1 2012 2012
dbSNP: rs2395157
rs2395157
TSBP1-AS1
5 0.827 0.240 6 32380368 intron variant A/G snv 0.24 0.700 1.000 1 2012 2012
dbSNP: rs2858331
rs2858331 		5 0.827 0.240 6 32713500 upstream gene variant A/G snv 0.42 0.700 1.000 1 2012 2012
dbSNP: rs9469220
rs9469220 		5 0.827 0.160 6 32690533 TF binding site variant G/A snv 0.53 0.710 1.000 1 2019 2019
dbSNP: rs3892710
rs3892710 		4 0.851 0.240 6 32715085 upstream gene variant C/T snv 0.22 0.700 1.000 1 2012 2012
dbSNP: rs443198
rs443198
NOTCH4
4 0.851 0.200 6 32222629 synonymous variant A/G snv 0.38 0.39 0.700 1.000 1 2012 2012
dbSNP: rs9268542
rs9268542 		4 0.851 0.280 6 32416944 intergenic variant A/G snv 0.35 0.700 1.000 1 2012 2012
dbSNP: rs12660382
rs12660382
HCP5
3 0.882 0.200 6 31475546 intron variant C/T snv 0.19 0.700 1.000 1 2012 2012
dbSNP: rs2244839
rs2244839
HCP5 ; HCG26
3 0.882 0.200 6 31470591 non coding transcript exon variant G/A;T snv 0.700 1.000 1 2012 2012
dbSNP: rs2246618
rs2246618
MICB
3 0.882 0.160 6 31511209 upstream gene variant C/T snv 0.32 0.700 1.000 1 2012 2012
dbSNP: rs2395163
rs2395163 		3 0.882 0.160 6 32420032 intergenic variant T/C snv 0.17 0.700 1.000 1 2012 2012
dbSNP: rs2395488
rs2395488
HCP5
3 0.882 0.160 6 31478132 non coding transcript exon variant A/G snv 0.34 0.700 1.000 1 2012 2012
dbSNP: rs3763309
rs3763309
BTNL2 ; TSBP1-AS1
3 0.882 0.160 6 32408196 upstream gene variant C/A;T snv 0.700 1.000 1 2012 2012
dbSNP: rs3916765
rs3916765
LOC102725019
3 0.882 0.200 6 32717773 upstream gene variant G/A snv 8.5E-02 0.700 1.000 1 2012 2012