Gene: HLA-DQA1 ×
Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs114549185
rs114549185
HLA-DQA1
1 1.000 0.040 6 32633427 intron variant C/G snv 5.2E-02 0.700 1.000 1 2012 2012
dbSNP: rs114798579
rs114798579
HLA-DQA1
1 1.000 0.040 6 32629564 intron variant G/A snv 4.6E-02 0.700 1.000 1 2012 2012
dbSNP: rs13207922
rs13207922
HLA-DQA1
1 1.000 0.040 6 32628470 intron variant G/T snv 5.0E-02 0.700 1.000 1 2012 2012
dbSNP: rs13211715
rs13211715
HLA-DQA1
1 1.000 0.040 6 32632691 intron variant G/A snv 5.9E-02 0.700 1.000 1 2012 2012
dbSNP: rs13215343
rs13215343
HLA-DQA1
1 1.000 0.040 6 32633277 intron variant C/A;G snv 5.0E-02 0.700 1.000 1 2012 2012
dbSNP: rs147897616
rs147897616
HLA-DQA1 ; LOC107986589
1 1.000 0.040 6 32638205 intron variant -/A;G ins 0.700 1.000 1 2012 2012
dbSNP: rs17843604
rs17843604
HLA-DQA1
2 0.925 0.120 6 32652506 intergenic variant C/T snv 0.49 0.700 1.000 1 2012 2012
dbSNP: rs199889539
rs199889539
HLA-DQA1 ; LOC107986589
1 1.000 0.040 6 32637642 intron variant -/T ins 0.700 1.000 1 2012 2012
dbSNP: rs2036202
rs2036202
HLA-DQA1
1 1.000 0.040 6 32628532 intron variant C/T snv 0.76 0.700 1.000 1 2012 2012
dbSNP: rs2133035
rs2133035
HLA-DQA1
1 1.000 0.040 6 32628698 intron variant C/A snv 0.27 0.700 1.000 1 2012 2012
dbSNP: rs2187668
rs2187668
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
20 0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 0.700 1.000 1 2016 2016
dbSNP: rs28383362
rs28383362
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32639087 3 prime UTR variant T/C snv 0.16 0.700 1.000 1 2012 2012
dbSNP: rs28383363
rs28383363
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32639091 3 prime UTR variant T/C snv 0.17 0.700 1.000 1 2012 2012
dbSNP: rs28383365
rs28383365
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32639165 3 prime UTR variant G/A snv 0.25 0.700 1.000 1 2012 2012
dbSNP: rs28383381
rs28383381
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32639511 3 prime UTR variant G/A snv 6.0E-03 0.700 1.000 1 2012 2012
dbSNP: rs28383403
rs28383403
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640258 intron variant T/C snv 2.5E-03 0.700 1.000 1 2012 2012
dbSNP: rs28383405
rs28383405
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640331 intron variant C/T snv 1.4E-02 0.700 1.000 1 2012 2012
dbSNP: rs28383408
rs28383408
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640474 intron variant C/G snv 8.7E-03 0.700 1.000 1 2012 2012
dbSNP: rs28383413
rs28383413
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640640 intron variant G/A snv 0.700 1.000 1 2012 2012
dbSNP: rs28383415
rs28383415
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640696 intron variant G/A snv 0.700 1.000 1 2012 2012
dbSNP: rs28383416
rs28383416
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640706 intron variant T/C snv 0.700 1.000 1 2012 2012
dbSNP: rs28383418
rs28383418
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640760 intron variant A/C snv 0.11 0.700 1.000 1 2012 2012
dbSNP: rs28383420
rs28383420
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32640930 intron variant T/C snv 0.18 0.700 1.000 1 2012 2012
dbSNP: rs28383428
rs28383428
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32641032 intron variant T/C snv 6.9E-02 0.700 1.000 1 2012 2012
dbSNP: rs28383457
rs28383457
HLA-DQA1 ; HLA-DQA2 ; LOC107986589
1 1.000 0.040 6 32641679 intron variant C/T snv 4.6E-02 0.700 1.000 1 2012 2012