Source: BEFREE ×
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs121912651
rs121912651
TP53
21 0.605 0.680 17 7674221 missense variant G/A;C snv 4.0E-06 0.710 1.000 1 1991 2016
dbSNP: rs17849781
rs17849781
TP53
8 0.701 0.480 17 7673788 missense variant G/A;C;T snv 0.010 1.000 1 1991 1991
dbSNP: rs397516435
rs397516435
TP53
3 0.851 0.280 17 7674945 stop gained G/A;C snv 4.0E-06 0.010 1.000 1 1996 1996
dbSNP: rs1360583020
rs1360583020
PXN
2 1.000 0.080 12 120215202 missense variant G/C snv 4.3E-06 0.010 1.000 1 2003 2003
dbSNP: rs34589476
rs34589476
MET
7 0.827 0.160 7 116771869 missense variant C/T snv 2.9E-03 3.2E-03 0.010 1.000 1 2003 2003
dbSNP: rs55985569
rs55985569
MET
3 0.925 0.080 7 116699588 missense variant G/A;T snv 3.7E-03 0.010 1.000 1 2003 2003
dbSNP: rs56391007
rs56391007
MET
15 0.752 0.200 7 116771936 missense variant C/T snv 7.9E-03 9.0E-03 0.010 1.000 1 2003 2003
dbSNP: rs876658657
rs876658657
MLH1
24 0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 0.010 < 0.001 1 2004 2004
dbSNP: rs121913507
rs121913507
KIT
49 0.614 0.400 4 54733155 missense variant A/T snv 0.010 < 0.001 1 2005 2005
dbSNP: rs121913682
rs121913682
KIT
51 0.605 0.400 4 54733167 missense variant A/G;T snv 0.010 < 0.001 1 2005 2005
dbSNP: rs2228001
rs2228001
XPC
60 0.570 0.480 3 14145949 missense variant G/T snv 0.63 0.65 0.010 1.000 1 2005 2005
dbSNP: rs1045642
rs1045642
ABCB1
214 0.456 0.840 7 87509329 synonymous variant A/G;T snv 0.50 0.020 1.000 2 2006 2012
dbSNP: rs2032582
rs2032582
ABCB1
97 0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 0.010 1.000 1 2006 2006
dbSNP: rs4866
rs4866
NUDT1
5 0.827 0.240 7 2249951 missense variant G/A snv 2.2E-02 1.8E-02 0.010 1.000 1 2006 2006
dbSNP: rs587781495
rs587781495
TP53
1 1.000 0.080 17 7676005 missense variant C/T snv 0.010 1.000 1 2006 2006
dbSNP: rs1057519847
rs1057519847
EGFR
72 0.570 0.560 7 55191821 missense variant CT/AG mnv 0.030 1.000 3 2007 2013
dbSNP: rs1057519848
rs1057519848
EGFR
72 0.570 0.560 7 55191822 missense variant TG/GT mnv 0.030 1.000 3 2007 2013
dbSNP: rs121434568
rs121434568
EGFR
73 0.568 0.560 7 55191822 missense variant T/A;G snv 0.030 1.000 3 2007 2013
dbSNP: rs4760
rs4760
PLAUR
1 1.000 0.080 19 43648948 missense variant A/G snv 0.12 0.11 0.010 1.000 1 2009 2009
dbSNP: rs6104
rs6104
SERPINB2 ; SERPINB10
6 0.807 0.160 18 63903295 missense variant C/G snv 0.29 0.28 0.010 1.000 1 2009 2009
dbSNP: rs4324798
rs4324798 		4 0.790 0.240 6 28808340 intergenic variant G/A snv 7.2E-02 0.020 1.000 2 2010 2011
dbSNP: rs1048943
rs1048943
CYP1A1
88 0.533 0.720 15 74720644 missense variant T/A;C;G snv 0.11 5.9E-02 0.010 1.000 1 2010 2010
dbSNP: rs1454328441
rs1454328441
MUC1
6 0.827 0.200 1 155192002 missense variant G/A;T snv 4.6E-06; 9.1E-06 0.010 1.000 1 2010 2010
dbSNP: rs1799814
rs1799814
CYP1A1
8 0.807 0.160 15 74720646 missense variant G/A;T snv 1.6E-05; 3.1E-02 0.010 1.000 1 2010 2010
dbSNP: rs577715207
rs577715207
TP63
8 0.827 0.160 3 189886413 missense variant T/A;C snv 4.0E-06; 4.0E-06 7.0E-06 0.010 1.000 1 2010 2010