Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1257891978
rs1257891978
FGF8 ; LOC105378457
1 1.000 0.120 10 101770499 missense variant G/A snv 4.0E-06 7.0E-06 0.010 1.000 1 2015 2015
dbSNP: rs2106416
rs2106416
AMELX ; ARHGAP6
1 1.000 0.120 X 11298622 missense variant C/A;T snv 1.1E-05; 0.19 0.010 1.000 1 2014 2014
dbSNP: rs306796
rs306796
STOM
1 1.000 0.120 9 121365057 intron variant C/T snv 0.33 0.010 1.000 1 2010 2010
dbSNP: rs368136178
rs368136178
TBX22
1 1.000 0.120 X 80024158 missense variant G/A;T snv 5.5E-06; 8.2E-05 0.010 1.000 1 2012 2012
dbSNP: rs772267475
rs772267475
NHLH1
1 1.000 0.120 1 160370811 missense variant G/A;C snv 8.6E-06 0.010 1.000 1 2019 2019
dbSNP: rs17820943
rs17820943
LOC102724968
2 0.925 0.120 20 40639876 regulatory region variant C/T snv 0.36 0.010 1.000 1 2020 2020
dbSNP: rs3923086
rs3923086
AXIN2
2 0.925 0.200 17 65553370 intron variant A/C;G snv 0.41 0.010 1.000 1 2012 2012
dbSNP: rs4460498
rs4460498 		2 0.925 0.120 9 97858130 downstream gene variant T/C snv 0.63 0.010 1.000 1 2015 2015
dbSNP: rs534391501
rs534391501
GRHL3
2 0.925 0.200 1 24334661 missense variant G/A snv 3.1E-04 1.7E-04 0.010 1.000 1 2017 2017
dbSNP: rs7224837
rs7224837
AXIN2
2 0.925 0.200 17 65532005 intron variant G/A snv 0.89 0.010 1.000 1 2012 2012
dbSNP: rs7552506
rs7552506
IRF6
2 0.925 0.240 1 209796557 splice region variant G/C snv 0.32 0.32 0.010 1.000 1 2008 2008
dbSNP: rs770182236
rs770182236
NME1 ; NME1-NME2
2 0.925 0.200 17 51155707 missense variant G/A snv 6.4E-05 7.0E-06 0.010 1.000 1 2017 2017
dbSNP: rs861019
rs861019
IRF6
2 0.925 0.120 1 209802041 splice region variant A/G snv 0.44 0.010 1.000 1 2008 2008
dbSNP: rs11696257
rs11696257
LOC102724968
3 0.882 0.240 20 40642176 regulatory region variant C/T snv 0.36 0.010 1.000 1 2019 2019
dbSNP: rs3758249
rs3758249
FOXE1 ; PTCSC2
3 0.882 0.200 9 97851858 intron variant T/C snv 0.63 0.010 1.000 1 2015 2015
dbSNP: rs4791331
rs4791331
NTN1
3 0.925 0.120 17 9028765 intron variant C/T snv 0.53 0.010 1.000 1 2020 2020
dbSNP: rs757422353
rs757422353
CDH1
3 0.882 0.200 16 68823432 missense variant C/G snv 4.0E-06 0.010 1.000 1 2019 2019
dbSNP: rs876658146
rs876658146
CDH1
3 0.882 0.200 16 68815743 missense variant A/G snv 0.010 1.000 1 2019 2019
dbSNP: rs227731
rs227731 		4 0.882 0.120 17 56695877 intergenic variant T/A;G snv 0.010 1.000 1 2012 2012
dbSNP: rs6072081
rs6072081
LOC102724968
4 0.851 0.120 20 40632414 intergenic variant A/G snv 0.49 0.010 1.000 1 2020 2020
dbSNP: rs7078160
rs7078160
SHTN1
4 0.851 0.120 10 117068049 intron variant G/A snv 0.19 0.010 1.000 1 2012 2012
dbSNP: rs8179096
rs8179096
TIMP2
4 0.851 0.200 17 78925567 upstream gene variant G/A;C snv 0.010 1.000 1 2012 2012
dbSNP: rs1269636220
rs1269636220
WDR11
5 0.851 0.280 10 120865109 missense variant A/G snv 0.010 1.000 1 2015 2015
dbSNP: rs1306416169
rs1306416169
NSMF
5 0.851 0.280 9 137453808 missense variant C/T snv 0.010 1.000 1 2015 2015
dbSNP: rs1487309678
rs1487309678
SEMA3A
5 0.851 0.280 7 84014246 missense variant C/T snv 8.0E-06 0.010 1.000 1 2015 2015