Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3743739
rs3743739
PLA2G15
3 16 68259417 synonymous variant T/C snv 0.19 0.22 0.700 1.000 1 2012 2012
dbSNP: rs12225230
rs12225230
SIK3
4 11 116857914 missense variant G/A;C;T snv 1.2E-05; 0.19; 4.0E-06 0.700 1.000 1 2012 2012
dbSNP: rs255
rs255
LPL
3 8 19954390 intron variant T/C snv 0.17 0.18 0.700 1.000 1 2012 2012
dbSNP: rs4970834
rs4970834
CELSR2
8 0.925 0.160 1 109272258 intron variant C/T snv 0.17 0.21 0.700 1.000 1 2012 2012
dbSNP: rs255052
rs255052
DUS2 ; DPEP2
4 0.925 0.040 16 67991092 intron variant G/A snv 0.17 0.17 0.700 1.000 3 2008 2012
dbSNP: rs2292318
rs2292318
SLC12A4
5 0.925 0.120 16 67951803 intron variant C/A;T snv 0.15 0.700 1.000 1 2012 2012
dbSNP: rs737337
rs737337
DOCK6
6 0.925 0.040 19 11236817 synonymous variant T/C snv 0.15 0.20 0.700 1.000 2 2010 2013
dbSNP: rs4922115
rs4922115
LPL
3 8 19965319 3 prime UTR variant G/A snv 0.15 0.14 0.700 1.000 1 2012 2012
dbSNP: rs2275545
rs2275545
ABCA1
2 9 104889245 intron variant A/G snv 0.14 0.18 0.700 1.000 1 2012 2012
dbSNP: rs316
rs316
LPL
3 8 19960925 missense variant C/A;T snv 0.13; 4.0E-06 0.700 1.000 1 2012 2012
dbSNP: rs2075650
rs2075650
TOMM40
45 0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 0.700 1.000 2 2012 2013
dbSNP: rs2278426
rs2278426
ANGPTL8 ; DOCK6
11 1.000 0.080 19 11239812 missense variant C/T snv 0.11 0.11 0.700 1.000 1 2013 2013
dbSNP: rs11643718
rs11643718
SLC12A3
10 0.807 0.240 16 56899607 missense variant G/A snv 0.11 8.4E-02 0.700 1.000 1 2012 2012
dbSNP: rs13306673
rs13306673
SLC12A3
3 1.000 0.040 16 56867019 intron variant C/T snv 0.10 0.13 0.700 1.000 1 2012 2012
dbSNP: rs343
rs343
LPL
4 1.000 0.080 8 19953276 intron variant C/A snv 9.8E-02 8.1E-02 0.700 1.000 1 2012 2012
dbSNP: rs328
rs328
LPL
19 0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02 0.700 1.000 2 2008 2012
dbSNP: rs2233455
rs2233455
NOL3
2 16 67174030 synonymous variant C/G;T snv 8.4E-02 0.14 0.700 1.000 1 2012 2012
dbSNP: rs11820589
rs11820589
BUD13
5 1.000 0.040 11 116763146 missense variant G/A snv 7.8E-02 0.10 0.700 1.000 1 2012 2012
dbSNP: rs12287066
rs12287066
APOA5
4 11 116791615 synonymous variant G/T snv 7.7E-02 0.10 0.700 1.000 1 2012 2012
dbSNP: rs9930761
rs9930761
CETP
2 16 56973280 intron variant T/C snv 5.9E-02 7.3E-02 0.700 1.000 1 2012 2012
dbSNP: rs2066718
rs2066718
ABCA1
7 0.882 0.120 9 104826974 missense variant C/G;T snv 4.3E-04; 5.4E-02 0.700 1.000 1 2012 2012
dbSNP: rs1800776
rs1800776
CETP
2 16 56961322 upstream gene variant C/A snv 5.2E-02 5.5E-02 0.700 1.000 1 2012 2012
dbSNP: rs5880
rs5880
CETP
10 0.827 0.040 16 56981179 missense variant G/C snv 5.2E-02 3.7E-02 0.700 1.000 4 2008 2014
dbSNP: rs5883
rs5883
CETP
5 1.000 0.040 16 56973441 synonymous variant C/T snv 5.1E-02 6.6E-02 0.700 1.000 2 2012 2012
dbSNP: rs13107325
rs13107325
SLC39A8
34 0.776 0.520 4 102267552 missense variant C/A;T snv 4.0E-06; 4.5E-02 0.700 1.000 2 2010 2013