Gene: PCAT1 ×
Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs17831626
rs17831626
PCAT1
1 1.000 0.080 8 127068178 intron variant G/T snv 0.31 0.700 1.000 1 2007 2007
dbSNP: rs183373024
rs183373024
PCAT1 ; PRNCR1 ; CASC19
1 1.000 0.080 8 127091872 non coding transcript exon variant A/G snv 4.5E-03 0.700 1.000 1 2018 2018
dbSNP: rs4506170
rs4506170
CASC8 ; PCAT1 ; CASC21
1 1.000 0.080 8 127311646 non coding transcript exon variant T/C snv 0.15 0.700 1.000 1 2016 2016
dbSNP: rs56005245
rs56005245
PCAT1 ; CASC19
1 1.000 0.080 8 127101181 intron variant C/T snv 0.24 0.700 1.000 1 2016 2016
dbSNP: rs6470494
rs6470494
PCAT1 ; CASC19 ; PCAT2
1 1.000 0.080 8 127075659 intron variant T/C snv 0.72 0.700 1.000 1 2007 2007
dbSNP: rs6993569
rs6993569
PCAT1
1 1.000 0.080 8 127071852 intron variant G/A snv 0.19 0.700 1.000 1 2007 2007
dbSNP: rs6994316
rs6994316
PCAT1 ; PCAT2
1 1.000 0.080 8 127072294 intron variant G/A snv 0.77 0.700 1.000 1 2007 2007
dbSNP: rs72725879
rs72725879
PCAT1 ; PRNCR1 ; CASC19
1 1.000 0.080 8 127091724 non coding transcript exon variant C/T snv 0.26 0.700 1.000 1 2015 2015
dbSNP: rs75777376
rs75777376
PCAT1 ; LOC105375751 ; LOC105375753
1 1.000 0.080 8 126783938 intron variant T/C snv 4.0E-03 0.700 1.000 1 2019 2019
dbSNP: rs76784613
rs76784613
PCAT1 ; CASC19 ; LOC105375752
1 1.000 0.080 8 127164718 intron variant A/G snv 1.2E-02 0.700 1.000 1 2018 2018
dbSNP: rs77541621
rs77541621
PCAT1
1 1.000 0.080 8 127064901 non coding transcript exon variant G/A snv 1.7E-02 0.700 1.000 1 2015 2015
dbSNP: rs7816535
rs7816535
PCAT1 ; CASC19
1 1.000 0.080 8 127125423 intron variant G/A snv 0.16 0.700 1.000 1 2007 2007
dbSNP: rs7825414
rs7825414
PCAT1
1 1.000 0.080 8 127069276 intron variant A/G snv 0.36 0.700 1.000 1 2007 2007
dbSNP: rs16901966
rs16901966
PCAT1 ; CASC19
3 0.925 0.080 8 127098007 intron variant A/G snv 0.13 0.030 1.000 3 2012 2016
dbSNP: rs620861
rs620861
POU5F1B ; CASC8 ; PCAT1 ; CASC21
3 0.925 0.080 8 127323428 intron variant G/A snv 0.36 0.030 0.667 3 2009 2017
dbSNP: rs13281615
rs13281615
POU5F1B ; CASC8 ; PCAT1 ; CASC21
18 0.716 0.360 8 127343372 intron variant A/G snv 0.43 0.020 1.000 2 2008 2009
dbSNP: rs7837328
rs7837328
POU5F1B ; CASC8 ; PCAT1
8 0.882 0.120 8 127410882 intron variant A/G snv 0.52 0.020 1.000 2 2014 2014
dbSNP: rs10505474
rs10505474
POU5F1B ; CASC8 ; PCAT1
3 0.925 0.080 8 127405259 intron variant T/C snv 0.47 0.010 1.000 1 2014 2014
dbSNP: rs12334903
rs12334903
PCAT1 ; LOC105375751
2 0.925 0.080 8 127038268 intron variant T/C snv 0.44 0.010 1.000 1 2010 2010
dbSNP: rs16901946
rs16901946
PCAT1 ; PRNCR1 ; CASC19
8 0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 0.010 1.000 1 2018 2018
dbSNP: rs1902432
rs1902432
PCAT1 ; LOC105375751
4 0.851 0.120 8 127012566 intron variant A/G snv 0.25 0.010 1.000 1 2018 2018
dbSNP: rs378854
rs378854
CASC8 ; PCAT1 ; CASC21
2 0.925 0.080 8 127311574 non coding transcript exon variant C/T snv 0.31 0.010 1.000 1 2011 2011
dbSNP: rs7014346
rs7014346
POU5F1B ; CASC8 ; PCAT1
14 0.732 0.240 8 127412547 intron variant A/G snv 0.63 0.010 1.000 1 2015 2015
dbSNP: rs7463708
rs7463708
PCAT1 ; PRNCR1 ; CASC19
7 0.807 0.120 8 127091810 non coding transcript exon variant G/T snv 0.27 0.010 1.000 1 2011 2011
dbSNP: rs7824364
rs7824364
PCAT1 ; CASC19
2 0.925 0.080 8 127123120 intron variant T/C snv 7.9E-02 0.010 1.000 1 2017 2017