Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE Among ε4/ε4 individuals, AD risk</span> increased substantially in a dose-dependent manner with the number of <i>APOE</i> promoter SNP rs405509 <i>T</i> alleles in EastAs <i>(TT</i>: OR (odds ratio) = 27.02, <i>p</i> = 8.80 × 10<sup>-94</sup>; <i>GT</i>: OR = 15.87, <i>p</i> = 2.62 × 10<sup>-9</sup>) and EuroAs (<i>TT</i>: OR = 18.13, <i>p</i> = 2.69 × 10<sup>-108</sup>; <i>GT</i>: OR = 12.63, <i>p</i> = 3.44 × 10<sup>-64</sup>), and rs405509-<i>T</i> homozygotes had a younger onset and more severe cortical atrophy than those with <i>G</i>-allele. 31426376

2019

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE Education, sex, and the APOE-rs405509 variant are associated with Alzheimer's disease and cognitive performance. 31100889

2019

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE We tested if the ε4 major isoform of the APOE gene and rs405509 and rs440446 promoter and intron-1 polymorphisms predicted risk of any dementia or Alzheimer's disease with diagnoses derived from the Hospital Discharge and Causes of Death Registers in 1453 participants of the Helsinki Birth Cohort Study. 30293724

2019

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE In the presented study, we investigated the association between -491 A/T (rs449647), -427C/T, (rs769446) and -219 T/G (rs405509) single nucleotide polymorphisms (SNPs) of APOE gene and AD risk in the Polish population. 29990559

2018

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE These results demonstrate that the rs405509 T/T allele of APOE causes an age-related cognitive decline in non-demented elderly people, possibly by modulating brain network communication efficiency, which may be beneficial for understanding the neural mechanisms of rs405509-related cognitive aging and AD pathogenesis. 27636845

2017

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE Rs449647 and rs405509 polymorphisms of <i>APOE</i> gene were not associated with an increase of risk of AD. 28900374

2017

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE Evidence demonstrates that the T allele of the single-nucleotide polymorphism rs405509 in the apolipoprotein E (APOE) promoter is a risk factor for Alzheimer's disease. 27259692

2016

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE Evidence demonstrates that the T allele of the single-nucleotide polymorphism rs405509 as the apolipoprotein E (APOE) promoter is a risk factor for Alzheimer's disease (AD). 26825091

2016

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE The polymorphism of the Apolipoprotein E (APOE) promoter rs405509 can regulate the transcriptional activity of the APOE gene and is related to Alzheimer's disease (AD). 26314833

2015

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE The single nucleotide polymorphisms (SNPs) rs449647, rs769446 and rs405509 in the promoter region of the APOE gene have been variously suggested to be epsilon 4-independent risk factors for Alzheimer's disease (AD). 19172988

2009

dbSNP: rs405509
rs405509
0.900 GeneticVariation BEFREE This association is biologically plausible as SNP rs405509 was shown to modify protein binding and transcriptional activity of the APOE protein in vitro and is in linkage disequilibrium with key known variants defining the e2, e3, and e4 alleles that modify risk of atherosclerosis, Alzheimer's disease risk, and progression to AIDS. 19808960

2009

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE APOE gene comprises of three alleles determined by two single nucleotide polymorphisms (rs429358 and rs7412) resulting in the protein isoforms, among which ApoE4 is a confirmed risk factor for Alzheimer's Disease. 29776682

2018

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE There was no interaction between rs9331896 in CLU and rs429358 (defining the ɛ4 allele) in APOE in predicting Alzheimer's disease or all dementia (P = 0.39 and P = 0.21). 29534716

2018

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE The APOE rs429358 variation significantly influenced the brain network characteristics, affecting the activation of nodes as well as the connectivity of edges in aMCI subjects.The cholesterol metabolism pathway gene-based imaging genetics approach may provide new opportunities to understand the mechanisms underlying AD and suggested that APOE rs429358 is a core genetic variation that is associated with disease-related differences in brain function. 26985771

2016

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE Subsequently, to evaluate comprehensively the APOE (apolipoprotein E) haplotype variants (E1/E2/E3/E4), the markers rs7412 and rs429358 were genotyped in 93 AD affected carriers of the E280A mutation. 26619808

2016

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE We applied our proposed method to explore the relation between the well-known AD risk SNP APOE rs429358 and three baseline brain imaging modalities (i.e., structural magnetic resonance imaging (MRI), fluorodeoxyglucose positron emission tomography (FDG-PET) and F-18 florbetapir PET scans amyloid imaging (AV45)) from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database. 27277494

2016

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE Three SNPs [rs429358 in APOE: odds ratio (OR)=4.24, 95% confidence interval (CI)=3.01-5.96, P=1.23×10; rs2075650 in APOE: OR=3.57, 95% CI=2.51-5.06, P=1.23×10; and rs677909 in PICALM: OR=0.63, 95% CI=0.49-0.81, P=0.00036, log additive model] were significantly associated with AD susceptibility after correction for multiple testing. 22975751

2014

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE Apolipoprotein E (APOE) genotype (ε2/ε3/ε4: rs429358 ε4 allele; rs7412 ε2 allele) is strongly associated with both lipid levels and Alzheimer's disease. 21215387

2011

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE ApoE single nucleotide polymorphisms (SNPs) Cys112Arg (Epsilon-4), and Arg158Cys (Epsilon-2) have been implicated in cardiovascular and Alzheimer's disease, but their role in colorectal cancer (CRC) has not been extensively studied. 19455140

2009

dbSNP: rs429358
rs429358
0.890 GeneticVariation BEFREE Here, we evaluate whether synthetic RNA/DNA oligonucleotides (chimeraplasts) can convert a dysfunctional gene, APOE4 (C, A and E, T, Cys112Arg), a risk factor for Alzheimer's disease and other neurological disorders, into wild-type APOE3. 15781970

2005

dbSNP: rs769446
rs769446
0.740 GeneticVariation BEFREE In the presented study, we investigated the association between -491 A/T (rs449647), -427C/T, (rs769446) and -219 T/G (rs405509) single nucleotide polymorphisms (SNPs) of APOE gene and AD risk in the Polish population. 29990559

2018

dbSNP: rs769446
rs769446
0.740 GeneticVariation BEFREE The findings of this literature review and meta-analysis have shown that rs769446 polymorphism in the promoter region of <i>APOE</i> gene could be a risk factor for AD. 28900374

2017

dbSNP: rs769446
rs769446
0.740 GeneticVariation BEFREE This study aims at examining the APOE promoter polymorphism rs769446 for possible association with AD in a Tunisian population. 26563666

2016

dbSNP: rs769446
rs769446
0.740 GeneticVariation BEFREE The single nucleotide polymorphisms (SNPs) rs449647, rs769446 and rs405509 in the promoter region of the APOE gene have been variously suggested to be epsilon 4-independent risk factors for Alzheimer's disease (AD). 19172988

2009

dbSNP: rs449647
rs449647
0.730 GeneticVariation BEFREE In the presented study, we investigated the association between -491 A/T (rs449647), -427C/T, (rs769446) and -219 T/G (rs405509) single nucleotide polymorphisms (SNPs) of APOE gene and AD risk in the Polish population. 29990559

2018