Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs200085146
rs200085146
0.700 GeneticVariation UNIPROT

dbSNP: rs748434421
rs748434421
0.700 GeneticVariation UNIPROT

dbSNP: rs774057024
rs774057024
0.700 GeneticVariation UNIPROT

dbSNP: rs750600586
rs750600586
0.010 GeneticVariation BEFREE Direct sequencing of the mutant band revealed that one patient had a C to T transition at codon 138 (Ala to Val) and one patient had a G to C transversion at codon 139 (Lys to Asn). p53 mutations in germline cells in hereditary cancer syndromes predispose the family members to the development of malignancies. 8321049

1993

dbSNP: rs876660829
rs876660829
0.010 GeneticVariation BEFREE Direct sequencing of the mutant band revealed that one patient had a C to T transition at codon 138 (Ala to Val) and one patient had a G to C transversion at codon 139 (Lys to Asn). p53 mutations in germline cells in hereditary cancer syndromes predispose the family members to the development of malignancies. 8321049

1993

dbSNP: rs28934576
rs28934576
0.100 GeneticVariation BEFREE Our results show: (1) wild-type p53 stimulates the transcription of reporter genes with p53CON and RGC in their 5' region while most p53 mutants occurring in human cancers have lost this activity; (2) the R273H mutant retains transcriptional activity for the p53CON sequence but not RGC; (3) some mutants are temperature-sensitive for the transcriptional activity with the p53CON but not the RGC sequence; (4) p53 mutants vary in their ability to inhibit wild-type p53 transactivation but there is no difference between p53CON and RGC sequences; (5) lung cancer cells with endogenous mutant p53 proteins (M246I in H23 cells and R248L in H322 cells) retain transcriptional activity for the p53CON but not the RGC sequence. 8336941

1993

dbSNP: rs11540652
rs11540652
0.050 GeneticVariation BEFREE Our results show: (1) wild-type p53 stimulates the transcription of reporter genes with p53CON and RGC in their 5' region while most p53 mutants occurring in human cancers have lost this activity; (2) the R273H mutant retains transcriptional activity for the p53CON sequence but not RGC; (3) some mutants are temperature-sensitive for the transcriptional activity with the p53CON but not the RGC sequence; (4) p53 mutants vary in their ability to inhibit wild-type p53 transactivation but there is no difference between p53CON and RGC sequences; (5) lung cancer cells with endogenous mutant p53 proteins (M246I in H23 cells and R248L in H322 cells) retain transcriptional activity for the p53CON but not the RGC sequence. 8336941

1993

dbSNP: rs1019340046
rs1019340046
0.010 GeneticVariation BEFREE Our results show: (1) wild-type p53 stimulates the transcription of reporter genes with p53CON and RGC in their 5' region while most p53 mutants occurring in human cancers have lost this activity; (2) the R273H mutant retains transcriptional activity for the p53CON sequence but not RGC; (3) some mutants are temperature-sensitive for the transcriptional activity with the p53CON but not the RGC sequence; (4) p53 mutants vary in their ability to inhibit wild-type p53 transactivation but there is no difference between p53CON and RGC sequences; (5) lung cancer cells with endogenous mutant p53 proteins (M246I in H23 cells and R248L in H322 cells) retain transcriptional activity for the p53CON but not the RGC sequence. 8336941

1993

dbSNP: rs63750217
rs63750217
0.010 GeneticVariation BEFREE No germline mutation was found in the whole coding sequences of hMSH2 and hMTH1, or in the conservative regions of hMLH1 in any patient, while one cancer DNA showed a somatic mutation at codon 682 (threonine to alanine) in hMSH2. 8766523

1996

dbSNP: rs63751002
rs63751002
0.010 GeneticVariation BEFREE No germline mutation was found in the whole coding sequences of hMSH2 and hMTH1, or in the conservative regions of hMLH1 in any patient, while one cancer DNA showed a somatic mutation at codon 682 (threonine to alanine) in hMSH2. 8766523

1996

dbSNP: rs1051740
rs1051740
0.050 GeneticVariation BEFREE Seventy-three Caucasian patients with ovarian cancer and 75 Caucasian-female controls without cancer were genotyped for the Tyr113His polymorphism by a polymerase chain reaction-restriction fragment length polymorphism assay. 8944076

1996

dbSNP: rs1800709
rs1800709
0.020 GeneticVariation BEFREE Testing of a sample of 413 unrelated individuals to examine the hypothesis that R841W might be a rare polymorphism detected one additional instance in a woman with breast cancer diagnosed at age 77 years, and cancer in one parent. 8968716

1996

dbSNP: rs149308960
rs149308960
0.010 GeneticVariation BEFREE Three patients with a family history of cancer were carrying a Gly160Cys germline substitution. 9195227

1997

dbSNP: rs1799930
rs1799930
0.030 GeneticVariation BEFREE The extraction method was combined with newly designed PCR-based assays for cancer susceptibility marker genes such as CYP1A1 (exon 7), CYP2E1 (Dra1, Rsa1), GSTM1 and NAT2 [NAT2*5A (C481T), NAT2*6A (G590A), NAT2*7A (G857A)]. 9214613

1997

dbSNP: rs1799931
rs1799931
0.020 GeneticVariation BEFREE The extraction method was combined with newly designed PCR-based assays for cancer susceptibility marker genes such as CYP1A1 (exon 7), CYP2E1 (Dra1, Rsa1), GSTM1 and NAT2 [NAT2*5A (C481T), NAT2*6A (G590A), NAT2*7A (G857A)]. 9214613

1997

dbSNP: rs1799929
rs1799929
0.010 GeneticVariation BEFREE The extraction method was combined with newly designed PCR-based assays for cancer susceptibility marker genes such as CYP1A1 (exon 7), CYP2E1 (Dra1, Rsa1), GSTM1 and NAT2 [NAT2*5A (C481T), NAT2*6A (G590A), NAT2*7A (G857A)]. 9214613

1997

dbSNP: rs28897672
rs28897672
0.020 GeneticVariation BEFREE The cancer-predisposing mutation C61G disrupts homodimer formation in the NH2-terminal BRCA1 RING finger domain. 9525870

1998

dbSNP: rs1800709
rs1800709
0.020 GeneticVariation BEFREE The approach is demonstrated in two cancer data sets: BRCA1 R841W and APC I1307K. 9585599

1998

dbSNP: rs1322051434
rs1322051434
APC
0.010 GeneticVariation BEFREE The approach is demonstrated in two cancer data sets: BRCA1 R841W and APC I1307K. 9585599

1998

dbSNP: rs1463038513
rs1463038513
APC
0.100 GeneticVariation BEFREE In the Ashkenazi Jewish population, the I1307K allele is unlikely to increase the risk of ovarian cancer or of cancer in general. 9679945

1998

dbSNP: rs1801155
rs1801155
APC
0.100 GeneticVariation BEFREE In the Ashkenazi Jewish population, the I1307K allele is unlikely to increase the risk of ovarian cancer or of cancer in general. 9679945

1998

dbSNP: rs587782529
rs587782529
0.010 GeneticVariation BEFREE Thus, the R337C mutant retains some functional activity yet leads to a predisposition to cancer, suggesting that even partial inactivation of p53 oligomerization is sufficient for accelerated tumour progression. 9704931

1998

dbSNP: rs1463038513
rs1463038513
APC
0.100 GeneticVariation BEFREE To evaluate the role of I1307K in cancer, we genotyped 5,081 Ashkenazi volunteers in a community survey. 9731533

1998

dbSNP: rs1801155
rs1801155
APC
0.100 GeneticVariation BEFREE To evaluate the role of I1307K in cancer, we genotyped 5,081 Ashkenazi volunteers in a community survey. 9731533

1998

dbSNP: rs1171303257
rs1171303257
ALB
0.010 GeneticVariation BEFREE The genotype spectrum discriminated on this strip includes the high-risk, or cancer-associated, HPV genotypes 16, 18, 26, 31, 33, 35, 39, 45, 51, 52, 55, 56, 58, 59, 68 (ME180), MM4 (W13B), MM7 (P291), and MM9 (P238A) and the low-risk, or non-cancer-associated, genotypes 6, 11, 40, 42, 53, 54, 57, 66, and MM8 (P155). 9738060

1998