Gene: HTT ×
Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10015979
rs10015979
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs110501
rs110501
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs11731237
rs11731237
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs1210554604
rs1210554604
HTT
0.010 GeneticVariation BEFREE In order to assess the importance of this pathway in HD pathology, JNK inhibitors including dominant-negative mutants of upstream kinases (ASK1(K709R), MEKK1(D1369A)), a c-Jun mutant (Delta169c-Jun) and the active domain of the scaffold protein JIP-1/IBI (IBI-JBD) were tested for their ability to mitigate the effect of htt171-82Q. 19022249

2009
dbSNP: rs13102260
rs13102260
HTT ; HTT-AS
0.010 GeneticVariation BEFREE The presence of the rs13102260 minor (A) variant on the HD disease allele was associated with delayed age of onset in familial cases, whereas the presence of the rs13102260 (A) variant on the wild-type HTT allele was associated with earlier age of onset in HD patients in an extreme case-based cohort. 25938884

2015
dbSNP: rs1313770
rs1313770
HTT ; HTT-AS
0.010 GeneticVariation BEFREE Haplotype A-7-A (H1) was observed in 47 out of 48 phase-known mutant chromosomes, obtained by segregation analysis, through the haplotype analysis of rs1313770-HD/CCG-rs82334, as it also was in 120 out of 166 chromosomes constructed by means of the PHASE program. 15832309

2005
dbSNP: rs2071655
rs2071655
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs2269499
rs2269499
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs2285086
rs2285086
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs2298969
rs2298969
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs2471347
rs2471347
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs2798296
rs2798296
HTT ; HTT-AS
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs362272
rs362272
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs363066
rs363066
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs363092
rs363092
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs363096
rs363096
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs3856973
rs3856973
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs6855981
rs6855981
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs71180116
rs71180116
HTT ; HTT-AS
CCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 0.700 CausalMutation CLINVAR

dbSNP: rs71180116
rs71180116
HTT ; HTT-AS
CCAGCAGCAGCAGCAGCAGCAGCAG 0.700 CausalMutation CLINVAR

dbSNP: rs82333
rs82333
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012
dbSNP: rs916171
rs916171
HTT
0.700 GeneticVariation GWASDB Common SNP-based haplotype analysis of the 4p16.3 Huntington disease gene region. 22387017

2012