Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs7850258
rs7850258
0.820 GeneticVariation BEFREE Four single-nucleotide polymorphisms (SNPs) in linkage disequilibrium at 9q22 near FOXE1 were associated with hypothyroidism at genome-wide significance, the strongest being rs7850258 (odds ratio [OR] 0.74, p = 3.96 × 10(-9)). 21981779

2011

dbSNP: rs7850258
rs7850258
0.820 GeneticVariation BEFREE Quantitative reporter assays in oral epithelial and thyroid cell lines show that the rs7850258 allele (G) associated with CLP and hypothyroidism has significantly greater enhancer activity than the allele associated with thyroid cancer (A). 25652407

2015

dbSNP: rs10759944
rs10759944
0.710 GeneticVariation BEFREE FOXE1 variants, associated with hypothyroidism, were not genome-wide significant (rs10759944: p = 1.08×10-6, β = -0.05). 25436638

2014

dbSNP: rs225014
rs225014
0.050 GeneticVariation BEFREE A new report indicates that carriers of the Thr92Ala-DIO2 polymorphism exhibit lower D2 catalytic activity and localized/systemic hypothyroidism. 30063552

2018

dbSNP: rs225014
rs225014
0.050 GeneticVariation BEFREE A polymorphism (Thr92Ala) in the gene encoding the deiodinase 2 (D2) enzyme that converts thyroxine to triiodothyronine in the brain was later identified in about 16% of hypothyroid persons. 22548953

2013

dbSNP: rs225014
rs225014
0.050 GeneticVariation BEFREE Thyroidectomized patients carrying Thr92Ala are at increased risk of reduced intracellular and serum T3 concentrations that are not adequately compensated for by LT4, thus providing evidence in favor of customized treatment of hypothyroidism in athyreotic patients. 28324063

2017

dbSNP: rs225014
rs225014
0.050 GeneticVariation BEFREE One hypothesis is that a SNP (Thr92Ala) in DIO2 (required for local production of T3 out of T4) interferes with its kinetics and/or action, resulting in a local hypothyroid state in the brain. 31617166

2019

dbSNP: rs225014
rs225014
0.050 GeneticVariation BEFREE The present study indicates that the combination of polymorphisms in <i>DIO2</i> (rs225014) and <i>MCT10</i> (rs17606253) enhances hypothyroid patients' preference for L-T4 + L-T3 replacement therapy. 28785541

2017

dbSNP: rs113488022
rs113488022
0.020 GeneticVariation BEFREE Screening for activating BRAF mutations in a series of 83 PTCs identified the most common V600E mutation in 39 cases (histologically, 38 classic PTCs and 1 sclerosing variant PTC) and a complex in-frame mutation involving amino acids V600-S605 in a stage III multicentric follicular variant PTC, occurring in a 50-year-old female patient, who was affected by hypothyroidism in autoimmune thyroiditis and had a family history of PTC and autoimmune thyroiditis. 18426810

2008

dbSNP: rs113488022
rs113488022
0.020 GeneticVariation BEFREE One month following BRAF(V600E) expression, mice displayed increased thyroid size, widespread alterations in thyroid architecture, and dramatic hypothyroidism. 21512141

2011

dbSNP: rs121913377
rs121913377
0.020 GeneticVariation BEFREE Screening for activating BRAF mutations in a series of 83 PTCs identified the most common V600E mutation in 39 cases (histologically, 38 classic PTCs and 1 sclerosing variant PTC) and a complex in-frame mutation involving amino acids V600-S605 in a stage III multicentric follicular variant PTC, occurring in a 50-year-old female patient, who was affected by hypothyroidism in autoimmune thyroiditis and had a family history of PTC and autoimmune thyroiditis. 18426810

2008

dbSNP: rs121913377
rs121913377
0.020 GeneticVariation BEFREE One month following BRAF(V600E) expression, mice displayed increased thyroid size, widespread alterations in thyroid architecture, and dramatic hypothyroidism. 21512141

2011

dbSNP: rs370991693
rs370991693
0.020 GeneticVariation BEFREE Two novel mutations have been detected, and we show that TG mutation p.A2215D promotes the retention of TG within the endoplasmic reticulum and reduces TG synthesis and secretion, causing mild hypothyroidism. 19509106

2009

dbSNP: rs370991693
rs370991693
0.020 GeneticVariation BEFREE The brother with the IVS30 + 1G>T/A2215D mutation and the two siblings with the IVS30+1G>T mutation had fetal or neonatal goiter and all had hypothyroidism. 18631008

2008

dbSNP: rs111033199
rs111033199
0.010 GeneticVariation BEFREE We describe a 46-year-old female with sensorineural deafness and hypothyroidism, who presented with severe hypokalaemic metabolic alkalosis during inter-current illnesses on two occasions, and who was found to be homozygous for a loss-of-function mutation (V138F) in SLC26A4. 21551164

2011

dbSNP: rs1126797
rs1126797
TPO
0.010 GeneticVariation BEFREE Two of the six SNPs revealed a significant association with hypothyroidism; Thr725Pro (rs732609) and Asp666Asp (rs1126797). 24420335

2014

dbSNP: rs1143627
rs1143627
0.010 GeneticVariation BEFREE To evaluate the hypothesis that the functional -31C/T polymorphism (rs1143627) in the gene encoding IL-1beta is associated with the intractability and the severity of autoimmune thyroid diseases, we genotyped this polymorphism in 64 patients with intractable Graves' disease (GD), 28 GD patients in remission, 49 patients with Hashimoto's disease (HD) who developed hypothyroidism (severe HD), 28 untreated euthyroid HD patients (mild HD) and 59 healthy volunteers. 19793334

2009

dbSNP: rs11611206
rs11611206
0.010 GeneticVariation BEFREE Allele G in rs11611206 increased people with HT towards the predisposition of hypothyroidism. 28839453

2017

dbSNP: rs121908862
rs121908862
0.010 GeneticVariation BEFREE After the finding of partial loss-of-function mutations leading to hyperthyrotropinemia (Sunthornthepvarakul et al., 1995) it was speculated that a more severe phenotype with hypothyroidism and hypoplasia of the gland (thyroid dysgenesis) would be the result, if complete loss-of-function mutations like the isoleucine167 to asparagine mutation would occur in a homozygote or compound heterozygote state. 8981017

1996

dbSNP: rs121908866
rs121908866
0.010 GeneticVariation BEFREE The W546X allele was detected in approximately 1 in 180 individuals and may be a major contributor to hypothyroidism in the Welsh population. 12629076

2003

dbSNP: rs1237473071
rs1237473071
0.010 GeneticVariation BEFREE These results suggest that P556L TSHR has a dominant negative effect on TSHR(W) by impairing polymer to monomer dissociation, which decreases TSH responsiveness and induces hypothyroidism in C.RF-Tshr(hyt/wild) mice. 22916127

2012

dbSNP: rs12492609
rs12492609
0.010 GeneticVariation BEFREE Further, there was an obvious difference in the genotype distributions of rs12492609 and rs7629750 between HT patients with hypothyroidism and those without hypothyroidism (<i>p</i> = 0.034 and <i>p</i> = 0.023, respectively). 31553233

2019

dbSNP: rs13306186
rs13306186
0.010 GeneticVariation BEFREE Genotyping results revealed that two mutations, c.G7192T (p.A2398S) in the FASN gene and c.C1883G (p.T628R) in the APOBR gene, were fully co‑segregated with established hypothyroidism phenotypes in the family. 30272292

2018

dbSNP: rs141185224
rs141185224
RET
0.010 GeneticVariation BEFREE We report a new RET point mutation [R694Q (CGG-->CAG)], serendipitously found in a 23-yr-old woman with hypothyroidism due to atrophic Hashimoto's thyroiditis and primary ovarian failure, without altered calcitonin secretion. 15472167

2004

dbSNP: rs148383040
rs148383040
0.010 GeneticVariation BEFREE Genotyping results revealed that two mutations, c.G7192T (p.A2398S) in the FASN gene and c.C1883G (p.T628R) in the APOBR gene, were fully co‑segregated with established hypothyroidism phenotypes in the family. 30272292

2018