Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1003342
rs1003342
0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919

2015

dbSNP: rs1004819
rs1004819
0.020 GeneticVariation BEFREE IL23R is an IBD susceptibility gene, but has no epistatic interaction with CARD15 and SLC22A4/5. rs1004819 is the major IL23R variant associated with CD in the German population, while the p.Arg381Gln IL23R variant is a protective marker for CD and UC. 17786191

2007

dbSNP: rs1004819
rs1004819
0.020 GeneticVariation BEFREE This study was aimed to investigate the possible association of Crohn's disease (CD) with inflammatory bowel disease gene 5 (IBD5) IGR2198a_1 (rs11739135), IGR2096a_1 (rs12521868) and interleukin-23 receptor (IL23R) genetic variant (rs1004819) in the Malaysian population. 22908971

2012

dbSNP: rs10051722
rs10051722
A 0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919

2015

dbSNP: rs10061469
rs10061469
A 0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919

2015

dbSNP: rs10063949
rs10063949
0.010 GeneticVariation BEFREE A genetic variant (rs10063949-G) in the SLC23A1 ascorbate transporter locus was identified and is associated with an increased risk of CD in a white Canadian IBD cohort. 24284447

2014

dbSNP: rs10065172
rs10065172
0.010 GeneticVariation BEFREE Susceptibility to Crohn disease (CD), an inflammatory bowel disease, is influenced by common variants at many loci like the exonic synonymous IRGM SNP (rs10065172, NM_001145805.1, c.313C>T). 21508684

2011

dbSNP: rs10065637
rs10065637
G 0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919

2015

dbSNP: rs10114470
rs10114470
0.010 GeneticVariation BEFREE rs1250569 (ZMIZ1) and rs10114470 (TL1A) are two novel loci that indicate susceptibility to IBD in Han-Chinese patients. 28456797

2017

dbSNP: rs10142466
rs10142466
0.700 GeneticVariation GWASCAT Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations. 26192919

2015

dbSNP: rs1020856343
rs1020856343
0.020 GeneticVariation BEFREE To determine whether the TC haplotype is also associated with IBD in a Japanese population, we genotyped L503F and -207G/C variants in Japanese subjects. 16373276

2006

dbSNP: rs1020856343
rs1020856343
0.020 GeneticVariation BEFREE The present results replicated the association of the OCTN1 rs1050152 (L503F) variant with CD and IBD overall. 21122496

2010

dbSNP: rs1042058
rs1042058
0.800 GeneticVariation GWASCAT Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease. 28067908

2017

dbSNP: rs1042058
rs1042058
C 0.800 GeneticVariation GWASDB Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233

2012

dbSNP: rs1042058
rs1042058
C 0.800 GeneticVariation GWASCAT Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. 23128233

2012

dbSNP: rs1042522
rs1042522
0.010 GeneticVariation BEFREE To investigate the associations between the rs1250569 (zinc finger MIZ-type containing 1, ZMIZ1), rs1042522 (tumour protein p53, TP53), and rs10114470 (tumour necrosis factor-like cytokine 1A, TL1A) polymorphisms and the development of inflammatory bowel disease (IBD) in a Chinese (Han) population. 28456797

2017

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE The C3435T polymorphism of the ABCB1/MDR1 gene is not a risk factor for IBD, including UC and CD, in the population coming from central Poland. 22661185

2012

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE We carried out a case-control study to examine the association of MDR1 (C1236T and C3435T), GSTT1, and GSTM1 polymorphisms with the risk of IBD. 26604430

2015

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE The role of the single nucleotide polymorphisms (SNPs) on positions 2677G>T/A and 3435C>T of the multi-drug-resistance gene 1 (MDR1) in inflammatory bowel disease (IBD) remains unclear. 17665184

2007

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE The statistically significant correlation was discovered between gender and C3435T</span> genotype both for IBD and CD patients, with 3435CT heterozygote prevailing in IBD and CD males. 25712653

2015

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE Significant association of Ala893 with IBD was observed by both case-control analysis (P=.002) and the pedigree disequilibrium test (PDT [P=.00020-.00030]) but not for the Asn21Asp or C3435T polymorphisms. 14610718

2003

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE A meta-analysis was carried out of our results and those from 8 previously published association studies of the C3435T variant in inflammatory bowel disease. 16633048

2006

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE In this study we have undertaken a meta-analysis of the available findings obtained with two SNPs polymorphism (C3435T and G2677T/A) in IBD; a significant association of 3435T allele and 3435TT genotype has been found with UC (OR = 1.17, P = 0.003 and OR = 1.36, P = 0.017, respectively). 16773678

2006

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE Interestingly, a negative association was found between MDR1 C3435T polymorphism in patients with a positive family history for IBD (OR = 0.44; 95% CI: 0.20-0.95) and articular manifestations (OR = 0.29; 95% CI: 0.13-0.68). 17260353

2007

dbSNP: rs1045642
rs1045642
0.100 GeneticVariation BEFREE This meta-analysis indicated that the C3435T polymorphism of MDR1 may not confer susceptibility to IBD. 24449364

2014