Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs74315433
rs74315433
0.040 GeneticVariation BEFREE Two other sequence changes (L159M and G160D) were associated with keratoconus and PPD, respectively, and involved a region adjacent to the homeodomain. 11978762

2002

dbSNP: rs74315432
rs74315432
0.030 GeneticVariation BEFREE One of the mutation (R166W) responsible for keratoconus altered the homeodomain and impaired DNA binding. 11978762

2002

dbSNP: rs74315434
rs74315434
0.010 GeneticVariation BEFREE Two other sequence changes (L159M and G160D) were associated with keratoconus and PPD, respectively, and involved a region adjacent to the homeodomain. 11978762

2002

dbSNP: rs140122268
rs140122268
0.010 GeneticVariation BEFREE Meta analysis of reports on an association of p.D144E change with keratoconus phenotype was performed. 17960127

2007

dbSNP: rs74315433
rs74315433
0.040 GeneticVariation BEFREE The G160V mutation was identified in 13 keratoconus patients (5.3%), and the N151S mutation was found in only one keratoconus patient (0.4%). 18626569

2008

dbSNP: rs148957473
rs148957473
0.030 GeneticVariation BEFREE Three VSX1 gene mutations, L159M, R166W, and H244R, are not associated with keratoconus. 18216574

2008

dbSNP: rs74315432
rs74315432
0.030 GeneticVariation BEFREE Three VSX1 gene mutations, L159M, R166W, and H244R, are not associated with keratoconus. 18216574

2008

dbSNP: rs1143627
rs1143627
0.020 GeneticVariation BEFREE The C allele of rs16944 (-511C>T, p=0.022, odds ratio of risk [OR]=1.46, 95% confidence intervals [CI] 0.94<2.27) and the T allele of rs1143627 (-31T>C, p=0.025, OR=1.43, 95% CI 0.92<2.22) were associated with a significantly increased risk of keratoconus in Korean patients. 19043479

2008

dbSNP: rs16944
rs16944
0.020 GeneticVariation BEFREE The C allele of rs16944 (-511C>T, p=0.022, odds ratio of risk [OR]=1.46, 95% confidence intervals [CI] 0.94<2.27) and the T allele of rs1143627 (-31T>C, p=0.025, OR=1.43, 95% CI 0.92<2.22) were associated with a significantly increased risk of keratoconus in Korean patients. 19043479

2008

dbSNP: rs201716527
rs201716527
0.010 GeneticVariation BEFREE The G160V mutation was identified in 13 keratoconus patients (5.3%), and the N151S mutation was found in only one keratoconus patient (0.4%). 18626569

2008

dbSNP: rs74315433
rs74315433
0.040 GeneticVariation BEFREE The change in p.G160D was observed in two patients with sporadic keratoconus. 19763142

2010

dbSNP: rs6138482
rs6138482
0.010 GeneticVariation BEFREE We did discover a significant association of 627+23G>A polymorphism distribution (VSX1) with unrelated patients diagnosed with the hereditary form of KC. 20023586

2010

dbSNP: rs148957473
rs148957473
0.030 GeneticVariation BEFREE Taken together, our results suggest that p.R166W and p.H244R could have possible pathogenic influences on KTCN. 22171159

2011

dbSNP: rs74315432
rs74315432
0.030 GeneticVariation BEFREE Taken together, our results suggest that p.R166W and p.H244R could have possible pathogenic influences on KTCN. 22171159

2011

dbSNP: rs61816761
rs61816761
0.010 GeneticVariation BEFREE We also studied the expression of filaggrin in normal and KC cornea and analysed 2 prevalent loss-of-function FLG alleles (R501X and 2282del4) in a KC population. 21701148

2011

dbSNP: rs771561481
rs771561481
0.010 GeneticVariation BEFREE Molecular analysis identified the VSX1 mutation Q175H in the affected brother and in the mother who had neither VKC nor keratoconus but only the VSX1 Q175H sequence change. 21365019

2011

dbSNP: rs4954218
rs4954218
0.740 GeneticVariation BEFREE These findings suggest SNP rs4954218, located near the RAB3GAP1 gene, previously reported to be associated with corneal malformation, is a potential susceptibility locus for keratoconus. 21979947

2012

dbSNP: rs4954218
rs4954218
0.740 GeneticVariation GWASCAT These findings suggest SNP rs4954218, located near the RAB3GAP1 gene, previously reported to be associated with corneal malformation, is a potential susceptibility locus for keratoconus. 21979947

2012

dbSNP: rs6430585
rs6430585
0.700 GeneticVariation GWASCAT A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries. 21979947

2012

dbSNP: rs8111998
rs8111998
0.700 GeneticVariation GWASCAT A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries. 21979947

2012

dbSNP: rs1800449
rs1800449
LOX
0.030 GeneticVariation BEFREE Sequencing of LOX exons in a subset of keratoconus patients identified two polymorphisms, rs1800449 and rs2288393, located in LOX transcripts I and II, associated with keratoconus in case-control and family samples with a meta P value of 0.02. 22661479

2012

dbSNP: rs2288393
rs2288393
LOX
0.030 GeneticVariation BEFREE Sequencing of LOX exons in a subset of keratoconus patients identified two polymorphisms, rs1800449 and rs2288393, located in LOX transcripts I and II, associated with keratoconus in case-control and family samples with a meta P value of 0.02. 22661479

2012

dbSNP: rs191047852
rs191047852
0.020 GeneticVariation BEFREE Our results suggest that c.2262A>C (p.Gln754His) mutation in DOCK9 may contribute to the KTCN phenotype in the large KTCN-014 family. 22045297

2012

dbSNP: rs4954218
rs4954218
0.740 GeneticVariation BEFREE Although the mechanism of disease association is yet to be determined, SNP rs4954218 is associated consistently with keratoconus and likely tags a functional variant that contributes to disease susceptibility. 23833071

2013

dbSNP: rs1324183
rs1324183
0.030 GeneticVariation BEFREE The SNPs rs1324183 in the MPDZ-NF1B gene and rs9938149 (between BANP and ZNF4659) were associated with KC in this independent cohort, but their association was via a non-corneal curvature route. 24265017

2013