Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10509291
rs10509291
0.010 GeneticVariation BEFREE And a total of 430 Eastern Chinese subjects (215 patients with nephrolithiasis and 215 age- and gender-matched controls) were recruited for the present study to investigate the associations between 6 common single nucleotide polymorphisms (SNPs) (i.e., rs10509291, rs3740051, rs932658, rs33957861, rs3818292 and rs1467568) in the SIRT1 gene and the incidence of kidney stones. 30714469

2019

dbSNP: rs10735810
rs10735810
VDR
0.010 GeneticVariation BEFREE The results demonstrated that there was no association found between the three SNPs (rs731236, rs7975232 and rs10735810) in the VDR gene and nephrolithiasis, whether in allele or genotype distribution. 29549381

2019

dbSNP: rs1467568
rs1467568
0.010 GeneticVariation BEFREE And a total of 430 Eastern Chinese subjects (215 patients with nephrolithiasis and 215 age- and gender-matched controls) were recruited for the present study to investigate the associations between 6 common single nucleotide polymorphisms (SNPs) (i.e., rs10509291, rs3740051, rs932658, rs33957861, rs3818292 and rs1467568) in the SIRT1 gene and the incidence of kidney stones. 30714469

2019

dbSNP: rs1799983
rs1799983
0.010 GeneticVariation BEFREE The endothelial nitric oxide synthase gene G894T, glutathione S-transferase (GSTM1 and GSTT1) polymorphisms as a risk factor in the patient with nephrolithiasis. 31445152

2019

dbSNP: rs199690076
rs199690076
0.010 GeneticVariation BEFREE We hence examined the frequency of p.Ser192Leu variants in our adult kidney stone cohort and compared the results to clinical findings of previously published cases of both mono- and biallelic p.Ser192Leu changes. 30798342

2019

dbSNP: rs2231142
rs2231142
0.010 GeneticVariation BEFREE ABCG2 SNP rs2231142 and the gout comorbidities including nephrolithiasis and CKD were associated (<i>P</i> = 0.014 and <i>P</i> = 0.026). 31367212

2019

dbSNP: rs367995295
rs367995295
0.010 GeneticVariation BEFREE The novel nonsense CYP24A1 mutation, p.R223*, was also found heterozygously in other family members with a medical history of nephrolithiasis. 31288237

2019

dbSNP: rs3818292
rs3818292
0.010 GeneticVariation BEFREE And a total of 430 Eastern Chinese subjects (215 patients with nephrolithiasis and 215 age- and gender-matched controls) were recruited for the present study to investigate the associations between 6 common single nucleotide polymorphisms (SNPs) (i.e., rs10509291, rs3740051, rs932658, rs33957861, rs3818292 and rs1467568) in the SIRT1 gene and the incidence of kidney stones. 30714469

2019

dbSNP: rs17576
rs17576
0.010 GeneticVariation BEFREE The R279Q polymorphism site with regard to the relationship with nephrolithiasis was not significant. 28205286

2018

dbSNP: rs1801725
rs1801725
0.010 GeneticVariation BEFREE CASR rs7652589_rs1801725 AG haplotype was 1.5-fold more frequent in nephrolithiasis-related ESRD than the GG haplotype (P = 0.004). 29763933

2018

dbSNP: rs2098435
rs2098435
0.010 GeneticVariation BEFREE With adjustments applied for sex, age and 24-h urinary volume and calcium excretion, the odds of having prevalent nephrolithiasis [n = 144 (8.2%)] associated with dp-ucMGP was 1.31 [95% confidence interval (CI) 1.04-1.64; P = 0.022]. dp-ucMGP levels were associated (P ≤ 0.001) with MGP variants rs2098435, rs4236 and rs2430692. 28340119

2018

dbSNP: rs2430692
rs2430692
0.010 GeneticVariation BEFREE With adjustments applied for sex, age and 24-h urinary volume and calcium excretion, the odds of having prevalent nephrolithiasis [n = 144 (8.2%)] associated with dp-ucMGP was 1.31 [95% confidence interval (CI) 1.04-1.64; P = 0.022]. dp-ucMGP levels were associated (P ≤ 0.001) with MGP variants rs2098435, rs4236 and rs2430692. 28340119

2018

dbSNP: rs307247
rs307247
PTH
0.010 GeneticVariation BEFREE The 2 SNPs (rs307247 and rs307248) of the 3' UTR, which were in strong linkage disequilibrium, were found to be significantly associated with kidney stone risk in the population of West Bengal, India. 29969593

2018

dbSNP: rs307248
rs307248
PTH
0.010 GeneticVariation BEFREE The 2 SNPs (rs307247 and rs307248) of the 3' UTR, which were in strong linkage disequilibrium, were found to be significantly associated with kidney stone risk in the population of West Bengal, India. 29969593

2018

dbSNP: rs4236
rs4236
0.010 GeneticVariation BEFREE With adjustments applied for sex, age and 24-h urinary volume and calcium excretion, the odds of having prevalent nephrolithiasis [n = 144 (8.2%)] associated with dp-ucMGP was 1.31 [95% confidence interval (CI) 1.04-1.64; P = 0.022]. dp-ucMGP levels were associated (P ≤ 0.001) with MGP variants rs2098435, rs4236 and rs2430692. 28340119

2018

dbSNP: rs6464214
rs6464214
0.010 GeneticVariation BEFREE HIPK2 polymorphisms rs2058265, rs6464214, and rs7456421 were associated with kidney stone disease in Chinese males not females. 29428801

2018

dbSNP: rs7456421
rs7456421
0.010 GeneticVariation BEFREE HIPK2 polymorphisms rs2058265, rs6464214, and rs7456421 were associated with kidney stone disease in Chinese males not females. 29428801

2018

dbSNP: rs752977102
rs752977102
0.010 GeneticVariation BEFREE We describe a novel APRT mutation (chr16:88877985 G / C; c.195 C>/G; p.His54Asp) presenting with CKD without nephrolithiasis. 30106368

2018

dbSNP: rs1042138
rs1042138
0.010 GeneticVariation BEFREE Altogether, present study indicated that the rs1042138 might not be used as a useful marker for susceptibility of kidney stone formation, whereas, the rs1801197 could definitely be considered as one of the risk factors for KSD in Indian population at least in West Bengal in particular. 28435134

2017

dbSNP: rs17646069
rs17646069
0.010 GeneticVariation BEFREE We selected single-nucleotide polymorphism (SNPs) including rs12654812 and rs11746443 from 5q32.3; rs12669187 and rs1000597 from 7q14.3; rs7981733, rs4142110 and rs17646069 from 13q14.1 and rs4293393 from 16p12.3 which were previously reported to be associated with nephrolithiasis. 28361944

2017

dbSNP: rs182089527
rs182089527
0.010 GeneticVariation BEFREE Our study provides genetic evidence that the rs182089527 mutation in PDE1A is involved in the development of NL and kidney cysts, which should help to improve personalized medicine for diagnosis and treatment. 29262781

2017

dbSNP: rs4293393
rs4293393
0.010 GeneticVariation BEFREE We selected single-nucleotide polymorphism (SNPs) including rs12654812 and rs11746443 from 5q32.3; rs12669187 and rs1000597 from 7q14.3; rs7981733, rs4142110 and rs17646069 from 13q14.1 and rs4293393 from 16p12.3 which were previously reported to be associated with nephrolithiasis. 28361944

2017

dbSNP: rs114234874
rs114234874
0.010 GeneticVariation BEFREE In summary, our data indicate that recurrent stone formers with the vacuolar H(+)-ATPase B1 subunit p.E161K SNP exhibit a urinary acidification deficit with an increased prevalence of calcium phosphate-containing kidney stones. 26453614

2016

dbSNP: rs184187143
rs184187143
0.010 GeneticVariation BEFREE Our results indicate that the variant G539R in the SLC26A6 gene is associated with kidney stone risk, providing a clear clue to further achieve insight into oxalate transport in kidney stone formation. 26812303

2016

dbSNP: rs755622
rs755622
0.010 GeneticVariation BEFREE CONCLUSIONS These results indicate that the MIF-AS rs755622 polymorphism may have a crucial role in the development of nephrolithiasis. 26895959

2016