Source: ALL
Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3764147
rs3764147
LACC1
0.820 GeneticVariation BEFREE We also confirmed the association between missense variant rs3764147 (c.760A>G [p.Ile254Val]) in the GWAS hit LACC1 (formerly C13orf31) and leprosy (p = 6.11 × 10<sup>-18</sup>, OR = 1.605). 29706348

2018
dbSNP: rs3764147
rs3764147
LACC1
0.820 GeneticVariation BEFREE Single-nucleotide variations in C13orf31 (LACC1) that encode p.C284R and p.I254V in a protein of unknown function (called 'FAMIN' here) are associated with increased risk for systemic juvenile idiopathic arthritis, leprosy and Crohn's disease. 27478939

2016
dbSNP: rs3764147
rs3764147
LACC1
0.820 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs3764147
rs3764147
LACC1
G 0.820 GeneticVariation GWASDB Genomewide association study of leprosy. 20018961

2009
dbSNP: rs3764147
rs3764147
LACC1
G 0.820 GeneticVariation GWASCAT Genomewide association study of leprosy. 20018961

2009
dbSNP: rs2275606
rs2275606
ADGB ; LOC101928661
0.810 GeneticVariation BEFREE Previous genome-wide association study (GWAS) identified two new leprosy associated loci (1p31.3 [rs3762318] and 6q24.3 [rs2275606]). 27712858

2016
dbSNP: rs3762318
rs3762318
C1orf141
0.810 GeneticVariation BEFREE Our results supported the positive association between the GWAS reported rs3762318 and leprosy, and SLC35D1 and IL23R might be the causal genes. 27712858

2016
dbSNP: rs6478108
rs6478108
TNFSF15
0.810 GeneticVariation BEFREE Using genetic data from published studies on CD, PBC and leprosy we revealed that bearing a T allele at rs6478108/rs6478109 (r(2) = 1) or rs4979462 was significantly associated with increased risk of CD and decreased risk of leprosy, while the T allele at rs4979462 was associated with significantly increased risk of PBC. 27507062

2016
dbSNP: rs2275606
rs2275606
ADGB ; LOC101928661
A 0.810 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs2275606
rs2275606
ADGB ; LOC101928661
A 0.810 GeneticVariation GWASCAT Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs3762318
rs3762318
C1orf141
A 0.810 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs3762318
rs3762318
C1orf141
A 0.810 GeneticVariation GWASCAT Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs6478108
rs6478108
TNFSF15
0.810 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs6478108
rs6478108
TNFSF15
A 0.810 GeneticVariation GWASDB Genomewide association study of leprosy. 20018961

2009
dbSNP: rs6478108
rs6478108
TNFSF15
A 0.810 GeneticVariation GWASCAT Genomewide association study of leprosy. 20018961

2009
dbSNP: rs16948876
rs16948876 		A 0.800 GeneticVariation GWASCAT Discovery of six new susceptibility loci and analysis of pleiotropic effects in leprosy. 25642632

2015
dbSNP: rs16948876
rs16948876 		A 0.800 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs16948876
rs16948876 		A 0.800 GeneticVariation GWASCAT Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs42490
rs42490
RIPK2
0.800 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs9302752
rs9302752 		0.800 GeneticVariation GWASDB Identification of two new loci at IL23R and RAB32 that influence susceptibility to leprosy. 22019778

2011
dbSNP: rs40457
rs40457 		A 0.800 GeneticVariation GWASDB Genomewide association study of leprosy. 20018961

2009
dbSNP: rs40457
rs40457 		A 0.800 GeneticVariation GWASCAT Genomewide association study of leprosy. 20018961

2009
dbSNP: rs42490
rs42490
RIPK2
G 0.800 GeneticVariation GWASDB Genomewide association study of leprosy. 20018961

2009
dbSNP: rs42490
rs42490
RIPK2
G 0.800 GeneticVariation GWASCAT Genomewide association study of leprosy. 20018961

2009
dbSNP: rs9302752
rs9302752 		G 0.800 GeneticVariation GWASDB Genomewide association study of leprosy. 20018961

2009