Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE Logistic regression analysis was conducted to analyze the risk factors influencing the occurrence of PCOS as well as those influencing the efficacy of IVF-ET. rs13405728, rs12478601, and family history of DM were influencing factors for the occurrence of PCOS. 30844144

2019

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE Results of the meta-analysis showed a significant association between PCOS and rs13405728 (for G vs. A: OR = 0.735, 95% CI = 0.699-0.773, p<.001; For GG vs. AG + AA: OR = 0.578, 95% CI = 0.436-0.767, p<.001; For GG + AG vs. AA: OR = 0.817, 95% CI = 0.741-0.901, p<.001) in Asian populations, and rs4539842 (for ins/ins vs. ins/non + non/non: OR = 0.686, 95% CI = 0.483-0.974, p=.035) and rs2293275 (for AA vs. AG + GG: OR = 4.115, 95% CI = 1.033-16.38, p=.045) in Caucasian populations, respectively. 30182769

2019

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE <b>Conclusions:</b> Genetic variants of PCOS (rs13405728 in <i>LHCGR</i> gene; rs13429458 in <i>THADA</i> gene and rs2479106 in <i>DENND1A</i> gene) may not be involved in the development of preeclampsia in Han Chinese women. 29727258

2019

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE <b>Conclusions:</b> Genetic variants of PCOS (rs13405728 in <i>LHCGR</i> gene; rs13429458 in <i>THADA</i> gene and rs2479106 in <i>DENND1A</i> gene) may not be involved in the development of preeclampsia in Han Chinese women. 29727258

2019

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE It was suggested that the TT genotype of LHCGR rs13405728, CC genotype of THADA rs12478601 and AG + GG genotype of DENND1A rs2479106 had poor outcomes of IVF-ET in treating PCOS. 30844144

2019

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE Setting homozygous wild-type genotype carrier as reference, rs10818854 and rs10986105 were associated with increased risk of PCOS, which persisted after controlling for key covariates, while reduced PCOS risk was seen with only rs2479106 under the additive model. 29325736

2018

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE This meta-analysis suggested that rs2479106 and rs10818854 polymorphisms in the DENND1A gene were associated with increased risk of PCOS. 26757598

2016

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE The present study suggested that the SNP rs13405728 in the LHCGR gene was associated with PCOS in Hui ethnic women, and its TT genotype characterized with higher level of TT, TG and LDL. 25978310

2015

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE Variants of rs3802457 in C9orf3 locus (P = 5.99×10-4) and rs13405728 in LHCGR locus (P = 3.73×10-4) were significantly associated with PCOS after the strict Bonferroni correction in our data set. 26474478

2015

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE The outcome was that the minor allele frequencies of SNPs rs10818854, rs2479106</span>, and rs10986105 were similar between women with PCOS and control women (P>0.05), even before correcting for multiple testing, and none of the tested DENND1A SNPs were associated with PCOS under co-dominant, dominant, or recessive genetic models. 25626177

2015

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE Our previous research had identified three susceptibility loci (rs2479106, DENND1A; rs13405728, LHCGR; rs13429458, THADA) for PCOS in Han Chinese women. 25978310

2015

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE In a previous genome-wide association study, the SNP variants rs13429458, rs12478601, rs2479106, rs10818854 and rs13405728 in the THADA, DENND1A and LHCGR genes were identified as being independently associated with PCOS. 23208300

2013

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE Although the marker with the strongest association in the Chinese PCOS genome-wide association study (rs13405728) was not informative in the European populations, we identified and genotyped three markers (rs35960650, rs2956355, and rs7562879) within 5 kb of rs13405728. 23118426

2013

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE Using a dominant model, the GG + AG group for rs2479106 in DENND1A was associated with elevated serum insulin levels 2 h after a glucose load in the patients with PCOS (P = 0.02). 23208300

2013

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE The aim of this study was to explore the polycystic ovary syndrome (PCOS) related single nucleotide polymorphisms (SNPs) rs13405728 (in gene LHCGR), rs13429458 (in gene THADA) and rs2479106 (in gene DENND1A) in women with endometrial carcinoma. 22902918

2012

dbSNP: rs13405728
rs13405728
0.900 GeneticVariation BEFREE Other risk variants at 2p16.3 (rs13405728), 2p21 (rs12468394, rs12478601, and rs13429458), and 9q33.3 (rs2479106), or variants correlated with them, did not associate with PCOS. 22547425

2012

dbSNP: rs13405728
rs13405728
A 0.900 GeneticVariation GWASDB Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012

dbSNP: rs13405728
rs13405728
A 0.900 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE The aim of this study was to explore the polycystic ovary syndrome (PCOS) related single nucleotide polymorphisms (SNPs) rs13405728 (in gene LHCGR), rs13429458 (in gene THADA) and rs2479106 (in gene DENND1A) in women with endometrial carcinoma. 22902918

2012

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE Other risk variants at 2p16.3 (rs13405728), 2p21 (rs12468394, rs12478601, and rs13429458), and 9q33.3 (rs2479106), or variants correlated with them, did not associate with PCOS. 22547425

2012

dbSNP: rs2479106
rs2479106
G 0.900 GeneticVariation GWASDB Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012

dbSNP: rs2479106
rs2479106
G 0.900 GeneticVariation GWASCAT Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome. 22885925

2012

dbSNP: rs2479106
rs2479106
0.900 GeneticVariation BEFREE The rs2479106 G allele was associated with decreased PCOS susceptibility, thus confirming previously reported findings of association between rs2479106 and PCOS. 22504079

2012

dbSNP: rs13405728
rs13405728
A 0.900 GeneticVariation GWASCAT We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011

dbSNP: rs13405728
rs13405728
A 0.900 GeneticVariation GWASDB We identified strong evidence of associations between PCOS and three loci: 2p16.3 (rs13405728; combined P-value by meta-analysis P(meta) = 7.55 × 10⁻²¹, odds ratio (OR) 0.71); 2p21 (rs13429458, P(meta) = 1.73 × 10⁻²³, OR 0.67); and 9q33.3 (rs2479106, P(meta) = 8.12 × 10⁻¹⁹, OR 1.34). 21151128

2011