Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1015909000
rs1015909000
0.010 GeneticVariation BEFREE Influence of the familial Alzheimer's disease-associated T43I mutation on the transmembrane structure and γ-secretase processing of the C99 peptide. 30755484

2019

dbSNP: rs10524523
rs10524523
0.010 GeneticVariation BEFREE We investigated the association between TOMM40 rs10524523, age of onset, and memory performance in patients with the PSEN1 M146L mutation in a large familial Alzheimer's disease Calabrian kindred, with a wide variability of onset not attributable to APOE. 23792692

2013

dbSNP: rs115865530
rs115865530
0.010 GeneticVariation BEFREE The K311R mutation might contribute to AD pathogenesis by overproducing toxic Aβ species and enhancing tau phosphorylation. 28269784

2017

dbSNP: rs1179768627
rs1179768627
0.010 GeneticVariation BEFREE The L235R mutation had not been previously reported, although other mutations in the same residue have also been associated with familial early-onset AD, providing support for the importance of this residue for the presenilin-1 function. 21501661

2011

dbSNP: rs1215971988
rs1215971988
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019

dbSNP: rs121917808
rs121917808
0.010 GeneticVariation BEFREE We discovered that L166P, A246E, E273A, G384A, and P436Q FAD mutations in PS1 abolished ER Ca(2+) leak function of PS1. 17431506

2007

dbSNP: rs1220355764
rs1220355764
APP
0.010 GeneticVariation BEFREE We report the generation and characterization of an iPSC line derived from a FAD patient carrying the PSEN1-G206D mutation. 31627126

2019

dbSNP: rs1223904774
rs1223904774
APP
0.010 GeneticVariation BEFREE To investigate the factors that drive the Abeta42/Abeta40 ratio and amyloid pathogenesis and to investigate the possible interactions between wild-type and FAD mutant PS1, which are co-expressed in transgenic animals, we expressed the PS1 M146V knock-in allele either on wild-type PS1 (PS1M146V/+) or PS1 null (PS1M146V/-) background and crossed these alleles with the Tg2576 APP transgenic mice. 16574645

2006

dbSNP: rs1231783932
rs1231783932
APP
0.050 GeneticVariation BEFREE These in vitro results were confirmed by in vivo experiments in transgenic mice expressing the PS2 N141I FAD mutant. 17962197

2008

dbSNP: rs1231783932
rs1231783932
APP
0.050 GeneticVariation BEFREE These results strongly suggest that the PS2 mutation (N141I) linked to FAD alters the metabolism of A beta/betaAPP to foster the production of the form of A beta that most readily deposits in amyloid plaques. 9050898

1997

dbSNP: rs1231783932
rs1231783932
APP
0.050 GeneticVariation BEFREE Functional analysis of such cleavage defective PS2 carrying the FAD mutation Asn-141 --> Ile showed that its Abeta42 producing activity was strongly reduced compared with cleavage-competent FAD PS2. 10575009

1999

dbSNP: rs1231783932
rs1231783932
APP
0.050 GeneticVariation BEFREE A novel factor, termed Humanin (HN), antagonizes against neurotoxicity by various types of familial Alzheimer's disease (AD) genes [V642I and K595N/M596L (NL) mutants of amyloid precursor protein (APP), M146L-presenilin (PS) 1, and N141I-PS2] and by Abeta1-43 with clear action specificity ineffective on neurotoxicity by polyglutamine repeat Q79 or superoxide dismutase 1 mutants. 11717357

2001

dbSNP: rs1231783932
rs1231783932
APP
0.050 GeneticVariation BEFREE The present study investigated the influence of two familial Alzheimer's-disease-linked presenilin2 variants (N141I and M239V) and a loss-of-function presenilin2 mutant (D263A) on the activity of the transient receptor potential canonical (TRPC)6 Ca(2+) entry channel. 15601622

2005

dbSNP: rs1281129992
rs1281129992
APP
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019

dbSNP: rs1302192564
rs1302192564
APP
0.010 GeneticVariation BEFREE Cosegregegation analysis and the structural as well as the presumed functional role of the mutated and highly conserved residue suggest FAD causing characteristics of the novel PSEN1 mutation Ala275Val. 24582897

2014

dbSNP: rs1307925400
rs1307925400
APP
0.010 GeneticVariation BEFREE In the presence of PS1-FAD mutations, the effects of G33A were attenuated, apparently attributable to a different mechanism of PS1-FAD mutants compared with APP-FAD mutants. 20452985

2010

dbSNP: rs1347585131
rs1347585131
APP
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019

dbSNP: rs1348800465
rs1348800465
0.010 GeneticVariation BEFREE Novel PSEN1 mutations (H214N and R220P) associated with familial Alzheimer's disease identified by targeted exome sequencing. 26925509

2016

dbSNP: rs139155954
rs139155954
0.010 GeneticVariation BEFREE Genetic Modifiers of Age at Onset in Carriers of the G206A Mutation in PSEN1 With Familial Alzheimer Disease Among Caribbean Hispanics. 26214276

2015

dbSNP: rs1393704451
rs1393704451
0.010 GeneticVariation BEFREE Genetic Modifiers of Age at Onset in Carriers of the G206A Mutation in PSEN1 With Familial Alzheimer Disease Among Caribbean Hispanics. 26214276

2015

dbSNP: rs1396086494
rs1396086494
APP
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019

dbSNP: rs140501902
rs140501902
0.010 GeneticVariation BEFREE We identified in breast cancer cases two germline alterations, R62H and R71W, in presenilin-2 (PS-2), a gene involved in familial Alzheimer's disease (FAD). 16474849

2006

dbSNP: rs1451944248
rs1451944248
APP
0.010 GeneticVariation BEFREE Cosegregegation analysis and the structural as well as the presumed functional role of the mutated and highly conserved residue suggest FAD causing characteristics of the novel PSEN1 mutation Ala275Val. 24582897

2014

dbSNP: rs1459435816
rs1459435816
APP
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019

dbSNP: rs1482790603
rs1482790603
0.010 GeneticVariation BEFREE Two novel variants (APP: p.D244G, p.K687Q), 3 variants not previously associated with FAD (APP: p.T297M, p.D332G; PSEN1: p.R157S), and 7 previously reported pathogenic variants (APP: p.V717I; PSEN1: p.M139I, p.T147I, p.L173W, p.F177S, p.R269H; PSEN2: p.V139M) were identified. 30598257

2019