Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs121918504
rs121918504
A 0.700 CausalMutation CLINVAR

dbSNP: rs1554196416
rs1554196416
A 0.700 CausalMutation CLINVAR

dbSNP: rs1554700718
rs1554700718
C 0.700 GeneticVariation CLINVAR

dbSNP: rs1554888939
rs1554888939
T 0.700 GeneticVariation CLINVAR

dbSNP: rs879253753
rs879253753
CT 0.700 CausalMutation CLINVAR

dbSNP: rs2162540
rs2162540
0.010 GeneticVariation BEFREE That is, rs2162540 was significantly associated with skeletal class II malocclusion, while others were associated with skeletal class III malocclusion. 31509720

2019

dbSNP: rs551639398
rs551639398
0.010 GeneticVariation BEFREE We cross-checked our exome data of 215 people for rare variants in ADAMTSL1 and found that the c.670C>G variant was associated with mandibular prognathism in families 2 and 4. 30714143

2019

dbSNP: rs3825393
rs3825393
0.010 GeneticVariation BEFREE A nonsynonymous common variant of MYO1H rs3825393, C>T, p.Pro1001Leu, was identified to be significantly associated with MP. 29986156

2018

dbSNP: rs13317
rs13317
0.010 GeneticVariation BEFREE We also identified 3 variants: rs13317 in FGFR1, rs149242678 in FGF20, and rs79176051 FGF12 associated with MP (P < .05). 28640125

2017

dbSNP: rs149242678
rs149242678
0.010 GeneticVariation BEFREE We also identified 3 variants: rs13317 in FGFR1, rs149242678 in FGF20, and rs79176051 FGF12 associated with MP (P < .05). 28640125

2017

dbSNP: rs372127537
rs372127537
0.010 GeneticVariation BEFREE The associations of common and rare variants with MP as a categorical phenotype and also continuous malocclusion phenotypes generated by principal component (PC) analysis were analyzed.One common variant, rs372127537, located in the 3'-untranslated region of FGF7 gene, was significantly related to PC1 (P  =  4.22 × 10), which explained 23.23% of the overall phenotypic variation observed and corresponded to vertical discrepancies ranging from short anterior face height to long anterior face height, after Bonferroni correction. 28640125

2017

dbSNP: rs79176051
rs79176051
0.010 GeneticVariation BEFREE We also identified 3 variants: rs13317 in FGFR1, rs149242678 in FGF20, and rs79176051 FGF12 associated with MP (P < .05). 28640125

2017

dbSNP: rs111419738
rs111419738
0.010 GeneticVariation BEFREE Interestingly, the Gly1121Ser variant in the ARHGAP21 gene was found to be shared by all MP individuals in the larger branch of the family with nearly complete penetrance. 25691070

2015

dbSNP: rs229038
rs229038
0.010 GeneticVariation BEFREE Final results suggested that 2 single-nucleotide polymorphisms (rs2738, rs229038) of ADAMTS1 were significantly associated with mandibular prognathism. 26124221

2015

dbSNP: rs2738
rs2738
0.010 GeneticVariation BEFREE Final results suggested that 2 single-nucleotide polymorphisms (rs2738, rs229038) of ADAMTS1 were significantly associated with mandibular prognathism. 26124221

2015

dbSNP: rs1793953
rs1793953
0.010 GeneticVariation BEFREE In the analysis of individual SNPs, the SNP rs1793953 in the COL2A1 gene showed a possible association with MP with regard to allelic frequency and genotypic distribution (p = 0.031; p = 0.025, respectively) in the 211 cases and 224 controls. 24386886

2014

dbSNP: rs6182
rs6182
GHR
0.010 GeneticVariation BEFREE Relationship between P561T and C422F polymorphisms in growth hormone receptor gene and mandibular prognathism. 24654940

2014

dbSNP: rs6184
rs6184
GHR
0.010 GeneticVariation BEFREE Relationship between P561T and C422F polymorphisms in growth hormone receptor gene and mandibular prognathism. 24654940

2014

dbSNP: rs4654388
rs4654388
0.010 GeneticVariation BEFREE In the analysis of single SNPs in the second stage, the allele of rs4654388 showed the strongest significant association with MP (P=0.008) and the rs4654388 G-allele was associated with a significantly increased risk of MP (OR: 1.78, 95% CI: 1.16-2.74). 20797695

2010