Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1990622
rs1990622
0.010 GeneticVariation BEFREE Intriguingly, the genotype that confers increased risk for developing FTLD-TDP (major, or T, allele of rs1990622) is associated with later age at onset and death in C9orf72 expansion carriers, providing an example of sign epistasis in human neurodegenerative disease. 24442578

2014

dbSNP: rs1481950
rs1481950
0.010 GeneticVariation BEFREE This study identified rs1481950 within ATP6V1H influencing human CSF BACE activity, which indicated that ATP6V1H gene may play some roles in the pathogenesis of neurodegenerative diseases such as AD. 29751835

2018

dbSNP: rs766001707
rs766001707
0.010 GeneticVariation BEFREE Machado-Joseph disease [MJD, also spinocerebellar ataxia type 3 (SCA3)] and familial amyloid polyneuropathy type I (FAP-I or ATTR V30M) are neurodegenerative disorders, inherited in an autosomal dominant fashion, which have a high prevalence in Portugal, probably due to a founder effect. 16630162

2006

dbSNP: rs6265
rs6265
0.040 GeneticVariation BEFREE Understanding the role of brain-derived neurotrophic factor (BDNF) in synaptic plasticity and synaptogenesis, the impact of the BDNF Val66Met polymorphism in Alzheimer's disease-relevant endophenotypes - including episodic memory and hippocampal volume - and the technological progress in measuring synaptic changes in humans all pave the way for a 'synaptic repair' therapy for neurodegenerative diseases that targets pathophysiology rather than pathogenesis. 23674053

2013

dbSNP: rs6265
rs6265
0.040 GeneticVariation BEFREE The common human Val66Met polymorphism of BDNF has been implicated in the pathophysiology of neuropsychiatric and neurodegenerative disorders, and in the outcome of pro-adaptive and therapeutic treatments. 30067287

2018

dbSNP: rs6265
rs6265
0.040 GeneticVariation BEFREE Here we review the role and relevance of the BDNF Val66Met polymorphism in neurodegenerative diseases, with particular emphasis on glaucoma, multiple sclerosis (MS), Alzheimer's disease (AD) and Parkinson's disease (PD). 29896439

2018

dbSNP: rs6265
rs6265
0.040 GeneticVariation BEFREE Our findings suggest that BDNF Val66Met and sex should be considered in future endeavors aimed at treating or preventing neurodegenerative disorders. 30448615

2019

dbSNP: rs759834365
rs759834365
0.040 GeneticVariation BEFREE Our findings suggest that BDNF Val66Met and sex should be considered in future endeavors aimed at treating or preventing neurodegenerative disorders. 30448615

2019

dbSNP: rs759834365
rs759834365
0.040 GeneticVariation BEFREE Understanding the role of brain-derived neurotrophic factor (BDNF) in synaptic plasticity and synaptogenesis, the impact of the BDNF Val66Met polymorphism in Alzheimer's disease-relevant endophenotypes - including episodic memory and hippocampal volume - and the technological progress in measuring synaptic changes in humans all pave the way for a 'synaptic repair' therapy for neurodegenerative diseases that targets pathophysiology rather than pathogenesis. 23674053

2013

dbSNP: rs759834365
rs759834365
0.040 GeneticVariation BEFREE Here we review the role and relevance of the BDNF Val66Met polymorphism in neurodegenerative diseases, with particular emphasis on glaucoma, multiple sclerosis (MS), Alzheimer's disease (AD) and Parkinson's disease (PD). 29896439

2018

dbSNP: rs759834365
rs759834365
0.040 GeneticVariation BEFREE The common human Val66Met polymorphism of BDNF has been implicated in the pathophysiology of neuropsychiatric and neurodegenerative disorders, and in the outcome of pro-adaptive and therapeutic treatments. 30067287

2018

dbSNP: rs113488022
rs113488022
0.010 GeneticVariation BEFREE Yet the expression of BRAF(V600E) in the haematopoietic stem cell lineage causes leukaemic and tumoural diseases but not neurodegenerative disease. 28854169

2017

dbSNP: rs121913377
rs121913377
0.010 GeneticVariation BEFREE Yet the expression of BRAF(V600E) in the haematopoietic stem cell lineage causes leukaemic and tumoural diseases but not neurodegenerative disease. 28854169

2017

dbSNP: rs587777606
rs587777606
0.010 GeneticVariation BEFREE Celia's encephalopathy (progressive encephalopathy with/without lipodystrophy (PELD)) is a childhood neurodegenerative disorder with a fatal prognosis before the age of 10, due to the variant c.985C>T in the BSCL2 gene that causes a cryptic splicing site leading to skipping of exon 7. 30903322

2019

dbSNP: rs755221106
rs755221106
0.010 GeneticVariation BEFREE Spinocerebellar ataxia 42 (SCA42) is a neurodegenerative disorder recently shown to be caused by c.5144G > A (p.Arg1715His) mutation in CACNA1G, which encodes the T-type voltage-gated calcium channel Ca<sub>V</sub>3.1. 31229688

2019

dbSNP: rs1424266770
rs1424266770
0.010 GeneticVariation BEFREE A specific polymorphism in the hemochromatosis (HFE) gene, H63D, is over-represented in neurodegenerative disorders such as amyotrophic lateral sclerosis and Alzheimer disease. 21349849

2011

dbSNP: rs646776
rs646776
0.010 GeneticVariation BEFREE To assess the influence of rs5848 and rs646776 polymorphisms in both serum GRN level and risk for common neurodegenerative diseases, we studied 304 patients with Parkinson's disease (PD), 217 individuals with Alzheimer's disease, 131 subjects with mild cognitive impairment, and 126 controls. 23398167

2013

dbSNP: rs104894201
rs104894201
0.010 GeneticVariation BEFREE CryAB R120G causes perinuclear formation of aggresomes containing preamyloid oligomer intermediates, which are wellknown as a primary toxic species in neurodegenerative disease. 22040875

2011

dbSNP: rs371557337
rs371557337
0.010 GeneticVariation BEFREE In the present study we aimed to study TTR V30M aggregates effect in autophagy, a cellular mechanism crucial for cell survival that has been implicated in the development of several neurodegenerative diseases. 27382986

2016

dbSNP: rs387907043
rs387907043
0.020 GeneticVariation BEFREE Mutations in CSPα (i.e., Leu115 to Arg substitution or deletion (Δ) of Leu116) cause adult neuronal ceroid lipofuscinosis (ANCL), a dominantly inherited neurodegenerative disease. 25905915

2015

dbSNP: rs387907043
rs387907043
0.020 GeneticVariation BEFREE Here we demonstrate that L115R and ΔL116 mutant proteins are mistargeted in neuroendocrine cells and form SDS-resistant aggregates, concordant with the properties of other mutant proteins linked to neurodegenerative disorders. 22902780

2012

dbSNP: rs75548401
rs75548401
GBA
0.010 GeneticVariation BEFREE The GBA variant, p.Thr408Met, was found to have an allele frequency of 6.94% in SND cases which was significantly higher compared with normal (0%) and other neurodegenerative disease pathologies (0.74%), suggesting that it is associated with MSA. 30203094

2018

dbSNP: rs63751177
rs63751177
GRN
0.010 GeneticVariation BEFREE MRI findings suggested a neurodegenerative disorder like NCL and prompted us to go for whole exome screen which revealed NCL type 11 due to homozygous mutation c.912G>A (p.Trp304Ter) in exon 9 of GRN gene (OMIM#614706). 30922528

2019

dbSNP: rs63751294
rs63751294
GRN
0.010 GeneticVariation BEFREE We measured the frequency of Arg493X in 3405 unrelated patients with various neurodegenerative diseases using Taqman single-nucleotide polymorphism (SNP) genotyping. 17826340

2007

dbSNP: rs5848
rs5848
0.010 GeneticVariation BEFREE We found that rs5848 was associated with an increased risk of neurodegenerative diseases in the homozygous (TT vs. CC: OR, 1.24; 95% CI, 1.10-1.39; P < 0.001) and recessive models (TT vs. CC + CT: OR, 1.23; 95% CI, 1.10-1.37; P < 0.001). 25578179

2015