Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1273593548
rs1273593548
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs756673959
rs756673959
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs367597251
rs367597251
0.010 GeneticVariation BEFREE <b>Methods:</b> Osteosarcoma cancer cell line MG-63 was transfected with Ras gene with G12V and Y40C site mutation. 31126199

2019

dbSNP: rs1800896
rs1800896
0.010 GeneticVariation BEFREE Additionally, a statistically significant association between the IL-10 -1082A/G (rs1800896) genotype and poor survival in osteosarcoma</span> patients was observed. 26503210

2016

dbSNP: rs8103992
rs8103992
0.010 GeneticVariation BEFREE An expression quantitative trait locus for cartilage intermediate layer protein 2 (CILP2), rs8103992, was significantly associated with osteosarcoma risk after adjustment for multiple comparisons (odds ratio, 1.35; 95% CI, 1.16-1.56 [P = 7.93×10<sup>-5</sup> and P<sub>adjusted</sub> =.034]). 30311632

2018

dbSNP: rs780673045
rs780673045
0.020 GeneticVariation BEFREE As a whole, 11 of 29 (38%) analyzed OS presented alterations in some of the analyzed G1 to S-phase checkpoint genes. 15167009

2004

dbSNP: rs861539
rs861539
0.040 GeneticVariation BEFREE Association between the DNA Repair Gene XRCC3 rs861539 Polymorphism and Risk of Osteosarcoma: a Systematic Review and Meta-Analysis 28345844

2017

dbSNP: rs1799782
rs1799782
0.010 GeneticVariation BEFREE Besides, no significant association of rs25487, rs1799782, and rs25489 with OS was observed. 30464596

2018

dbSNP: rs25489
rs25489
0.010 GeneticVariation BEFREE Besides, no significant association of rs25487, rs1799782, and rs25489 with OS was observed. 30464596

2018

dbSNP: rs699947
rs699947
0.010 GeneticVariation BEFREE By stratified analysis, AA genotype of rs699947 was associated with an increased risk of osteosarcoma</span> in those with shorter age, males and a family history of cancer, and GG genotype of rs2010963 was correlated with an increased risk of osteosarcoma in those with shorter age, females and a family history of cancer. 25550863

2014

dbSNP: rs2010963
rs2010963
0.010 GeneticVariation BEFREE By stratified analysis, AA genotype of rs69994</span>7 was associated with an increased risk of osteosarcoma</span> in those with shorter age, males and a family history of cancer, and GG genotype of rs2010963 was correlated with an increased risk of osteosarcoma in those with shorter age, females and a family history of cancer. 25550863

2014

dbSNP: rs531564
rs531564
0.010 GeneticVariation BEFREE CG +$ GG genotype of hsa-miR-124a rs531564 had decreased risk for OS and affected prognosis of OS. 27540978

2016

dbSNP: rs4938723
rs4938723
0.010 GeneticVariation BEFREE Compared with wild-type TT genotype, the variant genotypes of rs4938723 TC/CC were significantly associated with increased OS risk (TC vs. TT: OR, 1.97 [95% CI: 1.40-2.55], P = 0.021; CC vs. TT: OR, 2.76 [95% CI: 2.00-3.53], P = 0.009; TC + CC vs. TT: OR, 2.16 [95% CI: 1.61-2.70], P = 0.006), consistent with its decreased effect on plasma miR-34b (TC vs. TT: -0.32 (-0.43, -0.21), P < 0.001; CC vs. TT: -0.70 (-0.84, -0.56), P < 0.001; TC + CC vs. TT: -0.42 (-0.53, -0.32), P < 0.001). 24063968

2014

dbSNP: rs1061970
rs1061970
0.010 GeneticVariation BEFREE CT genotype and C allele of COL1A1 at rs1061970, and CG genotype and G allele of COL1A1 at rs2075559 are associated with decreased susceptibility to osteosarcoma</span> in the Chinese population. 24072491

2014

dbSNP: rs2075559
rs2075559
0.010 GeneticVariation BEFREE CT genotype and C allele of COL1A1 at rs1061970, and CG genotype and G allele of COL1A1 at rs2075559 are associated with decreased susceptibility to osteosarcoma in the Chinese population. 24072491

2014

dbSNP: rs756340448
rs756340448
0.010 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs11615
rs11615
0.100 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs3212986
rs3212986
0.030 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs171140
rs171140
0.010 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs1799793
rs1799793
0.100 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs1253660442
rs1253660442
0.010 GeneticVariation BEFREE Even though the role of single nucleotide polymorphisms of ATIC in chemotherapy-induced tumor necrosis has not been investigated yet, the ATIC 347C>G polymorphism may influence the levels of adenosine after MTX treatment, which may affect the histologic response of osteosarcoma. 28267080

2017

dbSNP: rs2372536
rs2372536
0.010 GeneticVariation BEFREE Even though the role of single nucleotide polymorphisms of ATIC in chemotherapy-induced tumor necrosis has not been investigated yet, the ATIC 347C>G polymorphism may influence the levels of adenosine after MTX treatment, which may affect the histologic response of osteosarcoma. 28267080

2017

dbSNP: rs17655
rs17655
0.020 GeneticVariation BEFREE Excision repair cross-complementing (ERCC) group 2 (XPD; rs13181 and rs1799793), group 5 (XPG; rs17655) and group 1 (XPA; rs3212986 and rs11615) polymorphisms were analyzed in a group of 130 homogenously treated patients with high-grade osteosarcoma, for association with event-free survival (EFS), using the Kaplan-Meier plots and log-rank test. 21826087

2012

dbSNP: rs11615
rs11615
0.100 GeneticVariation BEFREE Excision repair cross-complementing (ERCC) group 2 (XPD; rs13181 and rs1799793), group 5 (XPG; rs17655) and group 1 (XPA; rs3212986 and rs11615) polymorphisms were analyzed in a group of 130 homogenously treated patients with high-grade osteosarcoma, for association with event-free survival (EFS), using the Kaplan-Meier plots and log-rank test. 21826087

2012

dbSNP: rs12894467
rs12894467
0.010 GeneticVariation BEFREE Four polymorphisms in pre-miRNAs at 14q32 miRNA cluster were associated with osteosarcoma risk in the Spanish population (rs12894467, rs61992671, rs58834075 and rs12879262). 30337581

2018