Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs58834075
rs58834075
0.010 GeneticVariation BEFREE Four polymorphisms in pre-miRNAs at 14q32 miRNA cluster were associated with osteosarcoma risk in the Spanish population (rs12894467, rs61992671, rs58834075 and rs12879262). 30337581

2018

dbSNP: rs7025417
rs7025417
0.010 GeneticVariation BEFREE These findings suggest that the rs7025417 and rs3821204 may have a combined effect to protect against the development of OS by decreasing the expression levels of IL-33 or ST2. 29797504

2018

dbSNP: rs756340448
rs756340448
0.010 GeneticVariation BEFREE ERCC1 (C118T (rs11615) and C8092A (rs3212986)) and ERCC2 (A751C (rs171140) and G312A (rs1799793)) polymorphisms were analysed in 44 patients with osteosarcoma, who were treated with cisplatin based neoadjuvant chemotherapy. 29980176

2018

dbSNP: rs8103992
rs8103992
0.010 GeneticVariation BEFREE An expression quantitative trait locus for cartilage intermediate layer protein 2 (CILP2), rs8103992, was significantly associated with osteosarcoma risk after adjustment for multiple comparisons (odds ratio, 1.35; 95% CI, 1.16-1.56 [P = 7.93×10<sup>-5</sup> and P<sub>adjusted</sub> =.034]). 30311632

2018

dbSNP: rs12190287
rs12190287
0.010 GeneticVariation BEFREE The CG and GG genotypes of rs12190287 predict elevated risk of osteosarcoma. 28663539

2017

dbSNP: rs1253660442
rs1253660442
0.010 GeneticVariation BEFREE Even though the role of single nucleotide polymorphisms of ATIC in chemotherapy-induced tumor necrosis has not been investigated yet, the ATIC 347C>G polymorphism may influence the levels of adenosine after MTX treatment, which may affect the histologic response of osteosarcoma. 28267080

2017

dbSNP: rs17111750
rs17111750
0.010 GeneticVariation BEFREE The present study was designed to determine whether APE1 polymorphisms (rs1130409, rs1760944, rs1760941, rs2275008, rs17111750) are associated with OS. 28839218

2017

dbSNP: rs1760944
rs1760944
0.010 GeneticVariation BEFREE This study suggested that APE1 rs1760944 polymorphism is associated with decreased risk of developing OS and better survival of OS patients. 28839218

2017

dbSNP: rs217727
rs217727
0.010 GeneticVariation BEFREE This finding indicates that rs217727 polymorphism may play a role in genetic susceptibility to the risk of osteosarcoma, which may improve our understanding of the potential contribution of H19 SNPs to cancer pathogenesis. 28975992

2017

dbSNP: rs2275008
rs2275008
0.010 GeneticVariation BEFREE The present study was designed to determine whether APE1 polymorphisms (rs1130409, rs1760944, rs1760941, rs2275008, rs17111750) are associated with OS. 28839218

2017

dbSNP: rs2372536
rs2372536
0.010 GeneticVariation BEFREE Even though the role of single nucleotide polymorphisms of ATIC in chemotherapy-induced tumor necrosis has not been investigated yet, the ATIC 347C>G polymorphism may influence the levels of adenosine after MTX treatment, which may affect the histologic response of osteosarcoma. 28267080

2017

dbSNP: rs6218
rs6218
0.010 GeneticVariation BEFREE The presence of TC and CC genotypes of rs6218 indicated higher risk of osteosarcoma. 29232358

2017

dbSNP: rs745738344
rs745738344
TNF
0.010 GeneticVariation BEFREE Our subgroup analysis showed a significant association between IL-6 174G/C and IL-10 1082A/G and OS risk in Asians, while no such significant correlation was observed with TNF-α 308G/A, TNF-α 238G/A, TNF-β 252A/G and TGF-β1 29T/C polymorphisms. 29228633

2017

dbSNP: rs747126003
rs747126003
0.010 GeneticVariation BEFREE Our subgroup analysis showed a significant association between IL-6 174G/C and IL-10 1082A/G and OS risk in Asians, while no such significant correlation was observed with TNF-α 308G/A, TNF-α 238G/A, TNF-β 252A/G and TGF-β1 29T/C polymorphisms. 29228633

2017

dbSNP: rs10019009
rs10019009
0.010 GeneticVariation BEFREE We performed a functional analysis of rs10019009 via reverse transcription-polymerase chain reaction, alkaline phosphatase (ALP) activity in human osteosarcoma U 2 OS cells. 26960368

2016

dbSNP: rs1056629
rs1056629
0.010 GeneticVariation BEFREE This study aimed to explore the roles of microRNA-491-5p (miR-491) and its target MMP9 in the control of metastasis of osteosarcoma (OS) as well as how the rs1056629 polymorphism in the 3' untranslated region (3'UTR) of MMP9 compromises the interaction between miR-491 and MMP9. 27023472

2016

dbSNP: rs11556218
rs11556218
0.010 GeneticVariation BEFREE These findings suggest that rs11556218 TG/GG genotypes may be associated with increased susceptibility to OS, probably by increasing the production of IL16 level. 27703190

2016

dbSNP: rs1800871
rs1800871
0.010 GeneticVariation BEFREE However, the genotype and allele frequencies of IL-10 -819C/T (rs1800871) and -592A/C (rs1800872) polymorphisms in osteosarcoma patients did not significantly differ from controls. 26503210

2016

dbSNP: rs1800872
rs1800872
0.010 GeneticVariation BEFREE However, the genotype and allele frequencies of IL-10 -819C/T (rs1800871) and -592A/C (rs1800872) polymorphisms in osteosarcoma patients did not significantly differ from controls. 26503210

2016

dbSNP: rs1800896
rs1800896
0.010 GeneticVariation BEFREE Additionally, a statistically significant association between the IL-10 -1082A/G (rs1800896) genotype and poor survival in osteosarcoma</span> patients was observed. 26503210

2016

dbSNP: rs1872328
rs1872328
0.010 GeneticVariation BEFREE This is the first study replicating the association of ACYP2 variant rs1872328 with cisplatin-induced ototoxicity in patients with osteosarcoma who did not receive potentially ototoxic cranial irradiation. 26928270

2016

dbSNP: rs1989839
rs1989839
0.010 GeneticVariation BEFREE Furthermore, rs1989839C/T is also associated with the Enneking stage of osteosarcoma and risk of lung metastasis. 27880743

2016

dbSNP: rs1989839
rs1989839
0.010 GeneticVariation BEFREE The CT genotype of rs1989839 is highly related to elevated risk of osteosarcoma. 27880743

2016

dbSNP: rs2236947
rs2236947
0.010 GeneticVariation BEFREE One of the other 4 SNPs, rs2236947A/C, shows a borderline significance in predicting osteosarcoma risk. 27880743

2016

dbSNP: rs243865
rs243865
0.010 GeneticVariation BEFREE MMP2 rs243865 genotype was associated with increased risk for development of osteosarcoma in Chinese Han population. 26754027

2016