Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE In Asian populations, there were significant associations of rs3803662</span> and rs8051542 with breast cancer risk. 26239137

2015

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE In conclusion, we show that there is little overlap between the breast cancer risk single nucleotide polymorphisms (SNPs) identified so far and the SNPs associated with breast cancer prognosis, with the possible exceptions of LSP1-rs3817198 and TNRC9-rs3803662. 25611573

2015

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE The results indicated that both polymorphisms were significantly associated with the risk of breast cancer, with per allele OR = 1.35, (95%CI = 1.17-1.57) for rs2046210 and per allele OR = 1.24 (95%CI = 1.06-1.45) for rs4784227. 25531440

2014

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE These results indicate an additive effect of the TOX3 rs3803662 and 2q35 rs13387042 alleles for BC risk. 24532140

2014

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE We conclude that SNP rs3803662 is a putative risk factor for breast cancer in Chinese Han women. 24446301

2014

dbSNP: rs17879961
rs17879961
0.900 GeneticVariation BEFREE In total, 26,336 cases and 44,219 controls from 18 case-control studies were used in this meta-analysis, and significant associations of the CHEK2 I157T variant with cancer susceptibility were found (OR, 1.39; 95% CI, 1.19-1.63; p<0.0001), breast cancer (OR=1.58, 95% CI=1.42-1.75, p<0.00001) and colorectal cancer (OR=1.67, 95% CI=1.24-2.26, p=0.0008). 23713947

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE Despite some limitations, this meta-analysis demonstrates that the rs2046210 polymorphism may be a risk factor associated with increased breast cancer risk. 23609471

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE In summary, this meta-analysis suggests the participation of rs2046210 at 6q25.1 in the susceptibility for BC, especially in Europeans and Asians. 23888322

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE In joint analyses that included both SNPs, the rs2046210-A allele was associated with increased risk of breast cancer [odds ratio (OR) = 1.14; 95% confidence interval (CI) = 1.02-1.28], and the rs2046211-G allele was associated with reduced risk (OR = 0.80; 95% CI = 0.67-0.95). 23104177

2013

dbSNP: rs2046210
rs2046210
A 0.900 GeneticVariation GWASCAT Genome-wide association studies identify four ER negative-specific breast cancer risk loci. 23535733

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE The present meta-analysis demonstrated that the rs2046210 polymorphism may be associated with increased BC susceptibility, but this association varies in different ethnicities. 23785413

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE In Japanese women, rs2046210 and 3757318 located near the ESR1 gene are associated with a risk of breast cancer, as in other Asian women. 24289300

2013

dbSNP: rs2046210
rs2046210
0.900 GeneticVariation BEFREE Our findings emphasized the proof of principle that multiple interactions of genetic variants, including rs3757318, rs2046210, and rs4973768 may play important roles in the susceptibility of BC though the biological mechanisms underlying the observed associations need to be elucidated. 24265035

2013

dbSNP: rs2046210
rs2046210
C 0.900 GeneticVariation GWASDB Genome-wide association study in BRCA1 mutation carriers identifies novel loci associated with breast and ovarian cancer risk. 23544013

2013

dbSNP: rs2046210
rs2046210
C 0.900 GeneticVariation GWASCAT Genome-wide association study in BRCA1 mutation carriers identifies novel loci associated with breast and ovarian cancer risk. 23544013

2013

dbSNP: rs3803662
rs3803662
A 0.900 GeneticVariation GWASCAT Large-scale genotyping identifies 41 new loci associated with breast cancer risk. 23535729

2013

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE Recently, genetic polymorphism (rs3803662C>T) in TOX3 was reported to induce the risk of breast cancer. 24069142

2013

dbSNP: rs3803662
rs3803662
T 0.900 GeneticVariation GWASCAT Genome-wide association studies identify four ER negative-specific breast cancer risk loci. 23535733

2013

dbSNP: rs3803662
rs3803662
A 0.900 GeneticVariation GWASCAT Identification of a BRCA2-specific modifier locus at 6p24 related to breast cancer risk. 23544012

2013

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE We confirmed associations between rs13387042 (2q35), rs4973768 (SLC4A7), rs10941679 (5p12), rs2981582 (FGFR2), rs3817198 (LSP1), rs3803662 (TOX3), and rs6504950 (STXBP4) with breast cancer. 23893088

2013

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE Ten of the 11 breast cancer susceptibility loci reported by consortia also showed associations in our predominantly Caucasian study population, and the associations were independent of BMI; four FGFR2 SNPs and TNRC9-rs3803662 were among the most notable associations. 23717390

2013

dbSNP: rs3803662
rs3803662
T 0.900 GeneticVariation GWASCAT Genome-wide association study of breast cancer in the Japanese population. 24143190

2013

dbSNP: rs3803662
rs3803662
0.900 GeneticVariation BEFREE Three SNPs were significantly associated with a breast cancer risk in multivariate analysis: rs2046210 (per allele OR=1.37 [95% CI: 1.11-1.70]), rs3757318 (OR=1.33[1.05-1.69]), and rs3803662 (OR=1.28 [1.07-1.55]). 24289300

2013

dbSNP: rs17879961
rs17879961
0.900 GeneticVariation BEFREE Our research indicates that the CHEK2 I157T variant may be another important genetic mutation which increases risk of breast cancer, especially the lobular type. 22799331

2012

dbSNP: rs17879961
rs17879961
0.900 GeneticVariation BEFREE Comparing the prevalence of CHEK2 mutations in BC with controls revealed that carriers of an I157T variant had OR of 1.80 for luminal A subtype and carriers of truncating mutations had OR of 6.26 for luminal B subtype of BC. 21701879

2012