Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1200469268
rs1200469268
0.010 GeneticVariation BEFREE In the absence of BCR-ABL, the conventional diagnostic algorithm recommends JAK2 V617F mutation testing to support diagnosis of other MPN diseases such as polycythemia vera, essential thrombocythemia, and primary myelofibrosis. 30772299

2019

dbSNP: rs1441084781
rs1441084781
0.010 GeneticVariation BEFREE We found that the S100A mRNA levels were increased in MPN patient-derived circulatory CD34<sup>+</sup> cells, and that their protein expression levels were also augmented in their granulocytes and bone marrow stroma cells, depending on the JAK2V617F mutation allele burden. 29946821

2018

dbSNP: rs4858647
rs4858647
0.010 GeneticVariation BEFREE This study aimed to establish the additional contribution of the recently described MECOM rs2201862, HBS1L-MYB rs9376092 and THRB-RARB rs4858647 polymorphisms to the occurrence of MPN. 29047144

2018

dbSNP: rs562533120
rs562533120
0.010 GeneticVariation BEFREE Surprisingly, JAK2 46/1 haplotype was associated significantly not only with JAK2 V617F-mutated MPN, but also with CALR-mutated MPN (OR = 1.4; 95% CI = 1.1-1.8; P-value = .01). 29047144

2018

dbSNP: rs764634461
rs764634461
0.010 GeneticVariation BEFREE Thus, our results herein may provide clues to understand the pathogenesis mechanism of JAK2 F556V mutation in the MPNs. 29842959

2018

dbSNP: rs778767225
rs778767225
MOK
0.010 GeneticVariation BEFREE We found that the S100A mRNA levels were increased in MPN patient-derived circulatory CD34<sup>+</sup> cells, and that their protein expression levels were also augmented in their granulocytes and bone marrow stroma cells, depending on the JAK2V617F mutation allele burden. 29946821

2018

dbSNP: rs104894230
rs104894230
0.010 GeneticVariation BEFREE Further, one of the patients (c.35G>A; p.(Gly12Asp)) had a myeloproliferative disorder, and one subject (c.34G>C; p.(Gly12Arg)) exhibited an uncharacterized brain tumour. 28594414

2017

dbSNP: rs121913529
rs121913529
0.010 GeneticVariation BEFREE Further, one of the patients (c.35G>A; p.(Gly12Asp)) had a myeloproliferative disorder, and one subject (c.34G>C; p.(Gly12Arg)) exhibited an uncharacterized brain tumour. 28594414

2017

dbSNP: rs121918464
rs121918464
0.010 GeneticVariation BEFREE Activating mutations, such as E76K and D61Y, in PTPN11 (SHP2), a protein tyrosine phosphatase implicated in multiple cell signaling processes, are associated with 35% of patients with juvenile myelomonocytic leukemia (JMML), an aggressive childhood myeloproliferative neoplasm (MPN). 27840422

2017

dbSNP: rs12339666
rs12339666
0.010 GeneticVariation BEFREE In conclusion, germline variations at <i>JAK2</i> (both the 46/1 haplotype and rs12339666</span>) and <i>TERT</i> rs2736100 were associated with MPN</span>s in Taiwanese population. 29100304

2017

dbSNP: rs397507510
rs397507510
0.010 GeneticVariation BEFREE Activating mutations, such as E76K and D61Y, in PTPN11 (SHP2), a protein tyrosine phosphatase implicated in multiple cell signaling processes, are associated with 35% of patients with juvenile myelomonocytic leukemia (JMML), an aggressive childhood myeloproliferative neoplasm (MPN). 27840422

2017

dbSNP: rs562015640
rs562015640
0.010 GeneticVariation BEFREE Activating mutations, such as E76K and D61Y, in PTPN11 (SHP2), a protein tyrosine phosphatase implicated in multiple cell signaling processes, are associated with 35% of patients with juvenile myelomonocytic leukemia (JMML), an aggressive childhood myeloproliferative neoplasm (MPN). 27840422

2017

dbSNP: rs727503094
rs727503094
0.010 GeneticVariation BEFREE Further, one of the patients (c.35G>A; p.(Gly12Asp)) had a myeloproliferative disorder, and one subject (c.34G>C; p.(Gly12Arg)) exhibited an uncharacterized brain tumour. 28594414

2017

dbSNP: rs104894365
rs104894365
0.010 GeneticVariation BEFREE We have previously developed and characterized a knock-in mouse model that carries one of the most frequent KRAS-NS-related mutations, the K-Ras(V14I) substitution, which recapitulates most of the alterations described in NS patients, including MPDs. 27174785

2016

dbSNP: rs3733609
rs3733609
0.010 GeneticVariation BEFREE Altogether, we found a novel hereditary susceptible factor-TET2 rs3733609 C/T variant for the development of MPN, suggesting the variant may be partially responsible for the pathogenesis and accumulation of MPN. 26843622

2016

dbSNP: rs59384377
rs59384377
0.010 GeneticVariation BEFREE For these MPN cases plus V617F carriers, we replicated the germ line JAK2 46/1 haplotype (rs59384377: odds ratio [OR] = 2.4, P = 6.6 × 10(-89)), previously associated with V617F-positive MPN. 27365426

2016

dbSNP: rs1057519819
rs1057519819
0.010 GeneticVariation BEFREE Co-occurrence of hypertrophic cardiomyopathy and myeloproliferative disorder in a neonate with Noonan syndrome carrying Thr73Ile mutation in PTPN11. 26286251

2015

dbSNP: rs121913502
rs121913502
0.010 GeneticVariation BEFREE Three IDH2 R140Q mutations were found in 2/108 MPN (1.85%) and 1/22 MDS (4.54%) patients, while one IDH2 G145G allele was found in 0.92% (1/108) of MPN patients. 25486927

2015

dbSNP: rs16754
rs16754
WT1
0.010 GeneticVariation BEFREE Individuals carrying variant G alleles of WT1 rs16754 showed a relatively low prevalence of BCR-ABL1-negative MPN, compared with those carrying wild A alleles of WT1 rs16754 (Hazard ratio 0.10-0.65, P<0.05). 25932444

2015

dbSNP: rs796065343
rs796065343
0.010 GeneticVariation BEFREE Here we demonstrate that the most prevalent, activating mutation, CSF3R T618I, is sufficient to drive a lethal myeloproliferative disorder in a murine bone marrow transplantation model. 24081659

2013

dbSNP: rs1057519721
rs1057519721
0.010 GeneticVariation BEFREE In this study, we identify G935R, Y931C, and E864K mutations within the JAK2 kinase domain that confer resistance across a panel of JAK inhibitors, whether present in cis with JAK2 V617F (observed in MPNs) or JAK2 R683G (observed in B-ALL). 22271575

2012

dbSNP: rs12340895
rs12340895
0.010 GeneticVariation BEFREE Our results suggest that the JAK2 46/1 haplotype is a risk factor for MPN in the Chinese population, and patients with GG genotype in rs12340895 locus are susceptible to JAK2 V617F mutation. 23054641

2012

dbSNP: rs4495487
rs4495487
0.010 GeneticVariation BEFREE Our results indicate that the C allele of JAK2 rs4495487, in addition to the 46/1 haplotype, contributes significantly to the occurrence of JAK2 V617F-positive and JAK2 V617F-negative MPNs in the Japanese population. 22251709

2012

dbSNP: rs529311209
rs529311209
0.010 GeneticVariation BEFREE In this study, we identify G935R, Y931C, and E864K mutations within the JAK2 kinase domain that confer resistance across a panel of JAK inhibitors, whether present in cis with JAK2 V617F (observed in MPNs) or JAK2 R683G (observed in B-ALL). 22271575

2012

dbSNP: rs1057520016
rs1057520016
0.010 GeneticVariation BEFREE Although JAK2V617F is the predominant allele associated with MPNs, other activating Janus kinase 2 (JAK2) alleles (such as K539L, T875N) also have been identified in distinct MPNs. 21362419

2011