Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1060504000
rs1060504000
0.010 GeneticVariation BEFREE We aimed to determine the pathogenicity of previously reported variants (c.-28A>G and c.-7C>T) within the MLH1 5'untranslated region (UTR) in two individuals from unrelated suspected Lynch syndrome families. 25762362

2015

dbSNP: rs1260021106
rs1260021106
0.010 GeneticVariation BEFREE We aimed to determine the pathogenicity of previously reported variants (c.-28A>G and c.-7C>T) within the MLH1 5'untranslated region (UTR) in two individuals from unrelated suspected Lynch syndrome families. 25762362

2015

dbSNP: rs1392665848
rs1392665848
0.010 GeneticVariation BEFREE We encountered a large Irish Lynch syndrome kindred that carries the c.544A>G (p.Arg182Gly) alteration in the MLH1 gene and we undertook to study the variant. 22773173

2012

dbSNP: rs1418586322
rs1418586322
0.020 GeneticVariation BEFREE Although rare in the general population, the A636P mutation is detected in up to 7% of Ashkenazi Jewish patients with early age-of-onset colorectal cancer, and may account for up to one third of HNPCC in the Ashkenazi Jewish population. 15516845

2004

dbSNP: rs1418586322
rs1418586322
0.020 GeneticVariation BEFREE Although rare in the general population, A636P mutations are found at increased frequency in Ashkenazim with a personal or family history of colorectal or other HNPCC-associated cancers. 17414604

2007

dbSNP: rs1799977
rs1799977
0.020 GeneticVariation BEFREE The approach was validated by transfecting cDNA of wild-type (WT) MLH1, cDNAs bearing two previously identified polymorphisms (I219V and I219L) and two with confirmed hereditary nonpolyposis colorectal cancer (HNPCC) syndrome mutations (G224D and G67R). 16982745

2006

dbSNP: rs1799977
rs1799977
0.020 GeneticVariation BEFREE To evaluate the mutL homolog 1 (MLH1) I219V polymorphism in 124 unrelated South American individuals suspected of having Lynch syndrome, based on frequency, association with pathogenic MLH1 and mutS homolog 2 (MSH2) mutation and clinical features. 23060557

2012

dbSNP: rs267607713
rs267607713
0.010 GeneticVariation BEFREE Detailed characterization of MLH1 p.D41H and p.N710D variants coexisting in a Lynch syndrome family with conserved MLH1 expression tumors. 25060679

2015

dbSNP: rs28930073
rs28930073
0.010 GeneticVariation BEFREE Here, we describe a family that does not meet the international criteria for HNPCC, of which a young woman harbors a missense mutation (D132H). 16685411

2006

dbSNP: rs35045067
rs35045067
0.010 GeneticVariation BEFREE The pathogenicity of the K618A and Y646C mutations was questionable as their correlation with features typical of HNPCC was low and the outcome of the functional analysis was ambiguous. 16724012

2006

dbSNP: rs35502531
rs35502531
0.030 GeneticVariation BEFREE We conclude that MLH1 K618A is not a fully penetrant Lynch syndrome mutation, although it is not without effect, appearing to increase the risk of Lynch syndrome-associated tumors approximately twofold. 22426235

2012

dbSNP: rs35502531
rs35502531
0.030 GeneticVariation BEFREE The pathogenicity of the K618A and Y646C mutations was questionable as their correlation with features typical of HNPCC was low and the outcome of the functional analysis was ambiguous. 16724012

2006

dbSNP: rs35502531
rs35502531
0.030 GeneticVariation BEFREE The p.Lys618Ala variant should be considered a neutral variant for LS. 21247423

2011

dbSNP: rs376642306
rs376642306
0.010 GeneticVariation BEFREE In this study, we show segregation of the putative pathogenic MSH6 missense mutation c.1346T>C p.Leu449Pro with microsatellite instability-high Lynch syndrome-related tumours lacking MSH6 expression in a large 17th century pedigree. 16283884

2005

dbSNP: rs41295282
rs41295282
0.010 GeneticVariation BEFREE In contrast, the third amino-terminal mutation S93G did not affect the heterodimerization, and the MLH1(S93G)/PMS2 variant was functional in the in vitro MMR assay, given thus the nature of the HNPCC family in question. 11793442

2002

dbSNP: rs41295284
rs41295284
0.010 GeneticVariation BEFREE This outcome could explain the HNPCC familial cancers that present as microsatellite stable and with intact MMR, such as MLH(L607H). 20978114

2010

dbSNP: rs587778914
rs587778914
0.710 GeneticVariation BEFREE Q48P mutation in the hMLH1 gene associated with Lynch syndrome in three Hungarian families. 22395473

2012

dbSNP: rs587778937
rs587778937
0.710 GeneticVariation BEFREE Evidence from clinical, histological, immunohistochemical, and molecular genetic data suggests that MLH1 c.1664T>C (p.Leu555Pro) is likely to be the pathogenic cause of Lynch syndrome in this family. 23712482

2013

dbSNP: rs587778966
rs587778966
0.720 GeneticVariation BEFREE Despite these molecular similarities, an unusual spectrum of tumours is associated with hMLH1-Gly67Glu, which is not typical of those associated with Lynch syndrome and differs from those found in families carrying the hMLH1-Gly67Arg allele. 19142183

2009

dbSNP: rs587778966
rs587778966
0.720 GeneticVariation BEFREE The approach was validated by transfecting cDNA of wild-type (WT) MLH1, cDNAs bearing two previously identified polymorphisms (I219V and I219L) and two with confirmed hereditary nonpolyposis colorectal cancer (HNPCC) syndrome mutations (G224D and G67R). 16982745

2006

dbSNP: rs63749818
rs63749818
0.710 GeneticVariation BEFREE The novel nonsense germline point mutation c.392C>G in the codon 131 of MLH1(S131X) was identified as the underlying genetic cause of LS in three families. 23100212

2012

dbSNP: rs63749939
rs63749939
0.710 GeneticVariation BEFREE Despite these molecular similarities, an unusual spectrum of tumours is associated with hMLH1-Gly67Glu, which is not typical of those associated with Lynch syndrome and differs from those found in families carrying the hMLH1-Gly67Arg allele. 19142183

2009

dbSNP: rs63750193
rs63750193
0.010 GeneticVariation BEFREE In this study, we show segregation of the putative pathogenic MSH6 missense mutation c.1346T>C p.Leu449Pro with microsatellite instability-high Lynch syndrome-related tumours lacking MSH6 expression in a large 17th century pedigree. 16283884

2005

dbSNP: rs63750206
rs63750206
0.720 GeneticVariation BEFREE Despite these molecular similarities, an unusual spectrum of tumours is associated with hMLH1-Gly67Glu, which is not typical of those associated with Lynch syndrome and differs from those found in families carrying the hMLH1-Gly67Arg allele. 19142183

2009

dbSNP: rs63750206
rs63750206
0.720 GeneticVariation BEFREE The approach was validated by transfecting cDNA of wild-type (WT) MLH1, cDNAs bearing two previously identified polymorphisms (I219V and I219L) and two with confirmed hereditary nonpolyposis colorectal cancer (HNPCC) syndrome mutations (G224D and G67R). 16982745

2006