Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs2596542
rs2596542
0.020 GeneticVariation BEFREE Taken together our study suggest that MICA rs2596542 SNP impacts HCV-induced HCC susceptibility suggesting that genetic variants in MICA are of clinical relevance to hepatocarcinogenesis by impacting host immune response in chronic HCV infection. 31471884

2019

dbSNP: rs2596542
rs2596542
0.020 GeneticVariation BEFREE The C allele in MICA rs2596542 is a protective factor for hepatocarcinogenesis, whereas the T allele is a risk factor. 30882647

2019

dbSNP: rs28934571
rs28934571
0.020 GeneticVariation BEFREE In addition, an arginine to serine mutation at codon 249 of the p53 tumor suppressor gene is produced, abrogating the function of the tumor suppressor gene, and contributing to hepatocarcinogenesis. 24078988

2013

dbSNP: rs28934571
rs28934571
0.020 GeneticVariation BEFREE We suggest that p.R249S may contribute to hepatocarcinogenesis through interaction with HBx, conferring a subtle growth advantage at early steps of the transformation process, but that this interaction is not required for progression to advanced HCC. 20538734

2010

dbSNP: rs246871
rs246871
ITK ; MED7
0.010 GeneticVariation BEFREE These findings suggest that PD1 rs41386349 and rs6710479 and TIM3 rs246871 and interactions between PD1 and TIM3 polymorphisms may affect the susceptibility of chronic HBV infection and PD1 rs2227982, rs6710479, and rs7421861 may implicate in hepatocarcinogenesis. 30939292

2019

dbSNP: rs3821204
rs3821204
0.010 GeneticVariation BEFREE These findings suggest that ST2 rs3821204 CC genotype may contribute to hepatocarcinogenesis by enhancing ST2 production at the transcriptional and translational level. 29656959

2019

dbSNP: rs41386349
rs41386349
0.010 GeneticVariation BEFREE These findings suggest that PD1 rs41386349 and rs6710479 and TIM3 rs246871 and interactions between PD1 and TIM3 polymorphisms may affect the susceptibility of chronic HBV infection and PD1 rs2227982, rs6710479, and rs7421861 may implicate in hepatocarcinogenesis. 30939292

2019

dbSNP: rs6710479
rs6710479
0.010 GeneticVariation BEFREE These findings suggest that PD1 rs41386349 and rs6710479 and TIM3 rs246871 and interactions between PD1 and TIM3 polymorphisms may affect the susceptibility of chronic HBV infection and PD1 rs2227982, rs6710479, and rs7421861 may implicate in hepatocarcinogenesis. 30939292

2019

dbSNP: rs7421861
rs7421861
0.010 GeneticVariation BEFREE These findings suggest that PD1 rs41386349 and rs6710479 and TIM3 rs246871 and interactions between PD1 and TIM3 polymorphisms may affect the susceptibility of chronic HBV infection and PD1 rs2227982, rs6710479, and rs7421861 may implicate in hepatocarcinogenesis. 30939292

2019

dbSNP: rs12979860
rs12979860
0.010 GeneticVariation BEFREE In summary, the current study did not find a significant association between IL28B rs12979860 polymorphism and hepatocarcinogenesis. 27083168

2017

dbSNP: rs1367492395
rs1367492395
0.010 GeneticVariation BEFREE A novel mutant 10Ala/Arg together with mutant 144Ser/Arg of hepatitis B virus X protein involved in hepatitis B virus-related hepatocarcinogenesis in HepG2 cell lines. 26706415

2016

dbSNP: rs867384693
rs867384693
0.010 GeneticVariation BEFREE Double mutant P53 (N340Q/L344R) promotes hepatocarcinogenesis through upregulation of Pim1 mediated by PKM2 and LncRNA CUDR. 27167190

2016

dbSNP: rs145204276
rs145204276
0.010 GeneticVariation BEFREE Taken together, our findings provided evidence that rs145204276 may contribute to hepatocarcinogenesis by affecting methylation status of the GAS5 promoter and subsequently its transcriptional activity thus serving as a potential therapy target for HCC. 26163879

2015

dbSNP: rs671
rs671
0.010 GeneticVariation BEFREE ALDH2(E487K) mutation increases protein turnover and promotes murine hepatocarcinogenesis. 26150517

2015

dbSNP: rs11134527
rs11134527
0.010 GeneticVariation BEFREE rs11134527 may be a novel genetic risk factor of HCC in HBV-exposed subjects, can facilitate HBV preS deletion generation and predispose the host to the effect of T1674C/G and preS1 start codon mutation in hepatocarcinogenesis. 24118778

2014

dbSNP: rs56228771
rs56228771
0.010 GeneticVariation BEFREE Taken together, we provided initial evidence that rs56228771 may contribute to hepatocarcinogenesis, possibly by affecting SGSM3 expression through a miRNA-mediated regulation. 23918301

2014

dbSNP: rs738409
rs738409
0.010 GeneticVariation BEFREE Overall, these results suggest that rs738409 exerts a marked influence on hepatocarcinogenesis in patients with cirrhosis of European descent and provide a strong argument for performing further mechanistic studies to better understand the role of PNPLA3 in HCC development. 24114809

2014

dbSNP: rs391957
rs391957
0.010 GeneticVariation BEFREE These findings provided new insights into the pathogenesis of HCC and an unexpected effect of the interaction between rs391957 and Ets-2 on hepatocarcinogenesis, and especially supported the hypothesis that stress-related and evolutionarily conserved genetic variant(s) influencing transcriptional regulation could predict susceptibilities. 23416888

2013

dbSNP: rs897092263
rs897092263
0.010 GeneticVariation BEFREE In addition, an arginine to serine mutation at codon 249 of the p53 tumor suppressor gene is produced, abrogating the function of the tumor suppressor gene, and contributing to hepatocarcinogenesis. 24078988

2013

dbSNP: rs1049606
rs1049606
0.010 GeneticVariation BEFREE These included novel SNPs for hepatocarcinogenesis with HCV CCND2 rs1049606, RAD23B rs1805329, CEP164 rs573455, and GRP78rs430397 in addition to the known SNPs MDM2 rs2279744 and ALDH2 rs671. 22004425

2012

dbSNP: rs10680577
rs10680577
0.010 GeneticVariation BEFREE Taken together, our findings provided strong evidence for the hypothesis that rs10680577 contributes to hepatocarcinogenesis, possibly by affecting RERT-lncRNA structure and subsequently EGLN2 expression, making it a promising biomarker for early diagnosis of HCC. 23026137

2012

dbSNP: rs3859501
rs3859501
0.010 GeneticVariation BEFREE Further studies into the roles of rs3859501 and pri-miRNAs-371-373_ht2 haplotype in hepatocarcinogenesis are needed. 22848681

2012

dbSNP: rs4149963
rs4149963
0.010 GeneticVariation BEFREE Our result demonstrates for the first time that the Exo 1 T439M polymorphism does not have a major role in genetic susceptibility to hepatocarcinogenesis, at least in the population studied here. 22296401

2011

dbSNP: rs1052133
rs1052133
0.010 GeneticVariation BEFREE These results suggest that the hOGG1 Ser326Cys polymorphism may not play a major role as an independent factor in hepatocarcinogenesis. 17085873

2006

dbSNP: rs3732379
rs3732379
0.010 GeneticVariation BEFREE However, additional independent studies in HCC patients with different ethnic background will be needed to confirm the present study and to elucidate the functional role of CX3CR1 and its polymorphism V249I in chronic liver disease and hepatocarcinogenesis. 15809764

2005