Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs754332870
rs754332870
0.010 GeneticVariation BEFREE Analysis of the KRAS gene showed only a G12C variation in one large cell carcinoma (LCC) patient, whereas variants were not found in adenocarcinoma (ADC) and squamous cell carcinoma (SCC) cases. 30048458

2018

dbSNP: rs779196500
rs779196500
0.010 GeneticVariation BEFREE In addition, we found that the L104P mutation in the VCX gene (Variable charge, X-linked) was absent in white blood cell samples, but present at 11.1% frequency in the adjacent tissues and increased to 14.6% in HCC tissues, suggesting that this mutation might be a tumor driver gene driving HCC carcinogenesis. 28412734

2017

dbSNP: rs879253942
rs879253942
0.010 GeneticVariation BEFREE Interrelationships among genetic C677T polymorphism of 5,10-methylenetetrahydrofolate reductase, biochemical folate status, and lymphocytic p53 oxidative damage in association with tumor malignancy and survivals of patients with hepatocellular carcinoma. 23996892

2014

dbSNP: rs1064793929
rs1064793929
0.010 GeneticVariation BEFREE In contrast, the β-catenin mutation was associ</span>ated with better prognosis in both S100P-positive and -negative HCC</span>s. 23785431

2013

dbSNP: rs1288373809
rs1288373809
0.010 GeneticVariation BEFREE Our data showed that (1) the frequency of C609T NQO1 was significantly increased in TNM stage III HCC patients; (2) no significant association was found between p53 expression and C609T polymorphism of NQO1 gene; and (3) a tumor/non-tumor (T/N) ratio > 1.27 of NQO1 expression revealed by real-time qPCR analyses was positively correlated with poorer survival in patients with tumors >5 cm, suggesting that an increase of NQO1 expression may be an indicator of advanced tumor progression. 19688691

2009

dbSNP: rs1057519982
rs1057519982
0.010 GeneticVariation BEFREE Involvement of interferon regulatory factor 1 and S100C/A11 in growth inhibition by transforming growth factor beta 1 in human hepatocellular carcinoma cells. 15205326

2004

dbSNP: rs1457582183
rs1457582183
0.010 GeneticVariation BEFREE Complete sequence analysis of these samples demonstrated a missense mutation in exon 5 (K144I) and exon 7 (V255A) from HCC samples B6-21 and B6-2, respectively. 10340391

1999

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE No publication bias was found for all the meta-analysis as suggested by the Begg funnel plot and Egger tests.These results suggested that variants MDM2 SNP309 and p53 Arg72Pro are susceptibility factors for HCC; however, more studies are warranted to validate the results. 28885338

2017

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE No publication bias was found for all the meta-analysis as suggested by the Begg funnel plot and Egger tests.These results suggested that variants MDM2 SNP309 and p53 Arg72Pro are susceptibility factors for HCC; however, more studies are warranted to validate the results. 28885338

2017

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE No publication bias was found for all the meta-analysis as suggested by the Begg funnel plot and Egger tests.These results suggested that variants MDM2 SNP309 and p53 Arg72Pro are susceptibility factors for HCC; however, more studies are warranted to validate the results. 28885338

2017

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Our data suggest that Arg72Pro polymorphism in a WT p53 context may act as a primary driver of epigenetic changes in HCC. 25889455

2015

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE Our data suggest that Arg72Pro polymorphism in a WT p53 context may act as a primary driver of epigenetic changes in HCC. 25889455

2015

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE Our data suggest that Arg72Pro polymorphism in a WT p53 context may act as a primary driver of epigenetic changes in HCC. 25889455

2015

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE CG and GG genotypes in rs1042522 and heterozygote and homozygote in rs2279744 were significantly associated with an elevated risk of HCC. 25412941

2014

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE Two single nucleotide polymorphisms (SNPs) in the gene loci of p53 pathway, p53 codon 72 Arg72Pro and MDM2 SNP309 (T > G), have been shown to cause perturbation of p53 function, but the effect of the two SNPs on the risk of hepatocellular carcinoma (HCC) remains inconsistent. 23292895

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE In subgroup analysis by ethnicity, the pooled results suggested that the p53 codon 72 Arg/Pro polymorphism was associated with an increased risk of HCC in Asians and Caucasians (for Asians, ORProPro vs. ArgArg + ArgPro=1.17 (95 % CI, 1.02-1.34), P OR=0.025; for Caucasians, ORProPro vs. ArgArg = 1.65 (95 % CI, 1.07-2.56), P OR=0.025; ORProPro vs. ArgArg + ArgPro=1.74 (95 % CI, 1.14-2.66), P OR=0.010). 23564481

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE This study aimed to assess whether polymorphisms in the single-nucleotide polymorphism miR-34b/c T>C (rs4938723) and TP53 Arg72Pro (rs1042522) increase the risk of HCC and influence outcome in patients with HCC. 23632240

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE The study on p53 Arg72Pro and XRCC1 Arg399Gln polymorphism in HCC patients demonstrated differences in allele frequencies compared to their controls. 23053887

2013

dbSNP: rs1042522
rs1042522
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE This study aimed to assess whether polymorphisms in the single-nucleotide polymorphism miR-34b/c T>C (rs4938723) and TP53 Arg72Pro (rs1042522) increase the risk of HCC and influence outcome in patients with HCC. 23632240

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE Two single nucleotide polymorphisms (SNPs) in the gene loci of p53 pathway, p53 codon 72 Arg72Pro and MDM2 SNP309 (T > G), have been shown to cause perturbation of p53 function, but the effect of the two SNPs on the risk of hepatocellular carcinoma (HCC) remains inconsistent. 23292895

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE The study on p53 Arg72Pro and XRCC1 Arg399Gln polymorphism in HCC patients demonstrated differences in allele frequencies compared to their controls. 23053887

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE In addition, our findings further suggest that the combination of MDM2 SNP 309 and TP53 Arg72Pro genotypes confers higher risk to develop HCC. 24376578

2013

dbSNP: rs1131691014
rs1131691014
0.100 GeneticVariation BEFREE In subgroup analysis by ethnicity, the pooled results suggested that the p53 codon 72 Arg/Pro polymorphism was associated with an increased risk of HCC in Asians and Caucasians (for Asians, ORProPro vs. ArgArg + ArgPro=1.17 (95 % CI, 1.02-1.34), P OR=0.025; for Caucasians, ORProPro vs. ArgArg = 1.65 (95 % CI, 1.07-2.56), P OR=0.025; ORProPro vs. ArgArg + ArgPro=1.74 (95 % CI, 1.14-2.66), P OR=0.010). 23564481

2013

dbSNP: rs878854066
rs878854066
0.100 GeneticVariation BEFREE This study aimed to assess whether polymorphisms in the single-nucleotide polymorphism miR-34b/c T>C (rs4938723) and TP53 Arg72Pro (rs1042522) increase the risk of HCC and influence outcome in patients with HCC. 23632240

2013