Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE Taken together, our study suggested that the CT60 polymorphism (rs3087243) in CTLA-4 gene might confer susceptibility to the AITDs (GD/HT). 24697361

2014

dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE (3) regarding the subtypes of AITDs, patients with Graves' disease (GD) had a significant higher degree of C1858T polymorphism (TT vs. CC, OR=2.35, 95%CI=1.36˜4.05; TC vs. CC, OR=1.46, 95%CI=1.12˜1.89; TT/TC vs. CC, OR=1.54, 95%CI=1.33˜1.80; TT vs. TC/CC, OR=2.16, 95%CI=1.25˜3.72), while no association was observed in patients with Hashimoto's thyroiditis (HT).No publication bias was observed. 22374238

2012

dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE Significant difference in the distribution of the haplotype suggests that the PTPN22 gene rather than rs2476601 is involved in the development of AITD in the Japanese population. 20615141

2010

dbSNP: rs2476601
rs2476601
0.030 GeneticVariation BEFREE The single nucleotide polymorphism (SNP) C1858T within the PTPN22 gene was recently associated with autoimmune thyroid disease (AITD) and type I diabetes (T1D). 19090780

2009

dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE With respect to the rs3087243 (+6230G>A) polymorphism of CTLA4, the first sister had type 1 diabetes and AITD and had the GG genotype, whereas the second and third sisters, who had type 1 diabetes without AITD, had the AG genotype. 19506323

2009

dbSNP: rs3087243
rs3087243
0.030 GeneticVariation BEFREE Furthermore, a joint analysis, with the INS and CTLA4 SNPs, revealed that CTLA4 rs3087243, ERBB3 rs2292399, and CLEC16A rs2903692, but not INS rs689, were significant risk factors for the cooccurrence of AITD in Japanese T1D. 18940880

2009

dbSNP: rs1061502
rs1061502
0.010 GeneticVariation BEFREE Our results showed that the AG genotype and the minor allele G frequency of rs1131665 and rs1061502 in AITD patients were both higher than those of the controls (rs1131665: AG genotype: <i>P</i> = 0.017, OR = 1.968; allele G: <i>P</i> = 0.018, OR = 1.946; rs1061502: AG genotype: <i>P</i> = 0.029, OR = 1.866; allele G: <i>P</i> = 0.031, OR = 1.847). 30774658

2019

dbSNP: rs1131665
rs1131665
0.010 GeneticVariation BEFREE Our results showed that the AG genotype and the minor allele G frequency of rs1131665 and rs1061502 in AITD patients were both higher than those of the controls (rs1131665: AG genotype: <i>P</i> = 0.017, OR = 1.968; allele G: <i>P</i> = 0.018, OR = 1.946; rs1061502: AG genotype: <i>P</i> = 0.029, OR = 1.866; allele G: <i>P</i> = 0.031, OR = 1.847). 30774658

2019

dbSNP: rs12492609
rs12492609
0.010 GeneticVariation BEFREE We found that the allele T of rs12492609 in <i>TMEM39A</i> was associated with AITD and Hashimoto's thyroiditis (HT) (<i>p</i> = 0.023; <i>p</i> = 0.028 respectively). 31553233

2019

dbSNP: rs13277113
rs13277113
BLK
0.010 GeneticVariation BEFREE Genetic variants of rs13277113 and rs2736340 of BLK were associated with susceptibility to GD, HT and AITD in an ethnic Chinese population. 30589937

2019

dbSNP: rs17855750
rs17855750
0.010 GeneticVariation BEFREE Results Compared with controls, rs153109 displayed significant associations with GD in allele and genotype frequencies (P = 0.002 and P = 0.008, respectively) and rs17855750 displayed significant associations with HT in allele frequencies (P = 0.02), whereas no differences in genotype or allele frequencies were found between AITD patients and controls at rs181206. 30694795

2019

dbSNP: rs2069550
rs2069550
TG
0.010 GeneticVariation BEFREE Latitude and ethnicity significantly affected the association between rs2076740 and rs2069550 polymorphisms and AITD, indicating their protective effects in allele or dominant model (P = 0.012, 0.012, 0.012, 0.009, 0.009). 30139952

2019

dbSNP: rs2076740
rs2076740
TG
0.010 GeneticVariation BEFREE Latitude and ethnicity significantly affected the association between rs2076740 and rs2069550 polymorphisms and AITD, indicating their protective effects in allele or dominant model (P = 0.012, 0.012, 0.012, 0.009, 0.009). 30139952

2019

dbSNP: rs231775
rs231775
0.010 GeneticVariation BEFREE We analyzed the association between CTLA-4 rs231775 and FOXP3 rs3761548, rs3761549 polymorphisms and predisposition to autoimmune thyroid disease (AITD), inclusive of Hashimoto's thyroiditis (HT) and Graves' disease (GD) in South-Indian population. 30771152

2019

dbSNP: rs2736340
rs2736340
0.010 GeneticVariation BEFREE Genetic variants of rs13277113 and rs2736340 of BLK were associated with susceptibility to GD, HT and AITD in an ethnic Chinese population. 30589937

2019

dbSNP: rs3761548
rs3761548
0.010 GeneticVariation BEFREE There was no allelic association of rs3761548 and rs3761549 polymorphisms with AITD susceptibility, albeit a significant difference in genotype distribution with respect to rs3761549. 30771152

2019

dbSNP: rs3761549
rs3761549
0.010 GeneticVariation BEFREE There was no allelic association of rs3761548 and rs3761549 polymorphisms with AITD susceptibility, albeit a significant difference in genotype distribution with respect to rs3761549. 30771152

2019

dbSNP: rs7629750
rs7629750
0.010 GeneticVariation BEFREE In addition, the frequency of allele A at rs7629750 in AITD patients with onset age ≤18 years old was higher than that in AITD patients with onset age ≥19 (<i>p</i> = 0.046). 31553233

2019

dbSNP: rs853326
rs853326
TG
0.010 GeneticVariation BEFREE The association between rs2076740, rs2069550, and rs853326 polymorphisms and AITD risk is significantly affected by study characteristics. 30139952

2019

dbSNP: rs1544410
rs1544410
VDR
0.010 GeneticVariation BEFREE <i>VDR</i> rs1544410 polymorphism was associated with a reduced risk of AITD in European and African populations, but with an increased risk of AITD in Asian populations. 29765404

2018

dbSNP: rs2228570
rs2228570
VDR
0.010 GeneticVariation BEFREE <i>VDR</i> rs2228570 polymorphism was associated with a reduced risk of AITD in Asian populations. 29765404

2018

dbSNP: rs2618431
rs2618431
0.010 GeneticVariation BEFREE Similarly, compared with that in female controls, allele G of rs2618431 was increased in the female AITD patients. 30351170

2018

dbSNP: rs4840568
rs4840568
BLK
0.010 GeneticVariation BEFREE Allele A of rs4840568 linked to the susceptibility of the AITD teenagers. 30351170

2018

dbSNP: rs731236
rs731236
VDR
0.010 GeneticVariation BEFREE The overall results indicated that <i>VDR</i> rs731236 and rs2228570 polymorphisms were significantly associated with a reduced risk of AITD. 29765404

2018

dbSNP: rs7574865
rs7574865
0.010 GeneticVariation BEFREE <b>Conclusion:</b> This meta-analysis showed a significant association between <i>STAT4</i> rs7574865 polymorphism and AITD susceptibility. 30666271

2018