DisGeNET - a database of gene-disease associations

List of associated variants

Alcoholic Intoxication, Chronic, C0001973

Source: GWASCAT ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	18
rs6265	BDNF ; BDNF-AS	0.436	0.760	11	27658369	missense variant	C/T	snv	0.19	0.15	5
rs671	ALDH2	0.529	0.840	12	111803962	missense variant	G/A	snv	1.9E-02	5.8E-03	21
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	11
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv		0.41	18
rs1229984	ADH1B	0.570	0.560	4	99318162	missense variant	T/C;G	snv	0.90		25
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	55
rs16969968	CHRNA5	0.653	0.360	15	78590583	missense variant	G/A	snv	0.26	0.24	3
rs8050136	FTO	0.716	0.560	16	53782363	intron variant	C/A	snv		0.40	9
rs9282858	SRD5A2	0.716	0.320	2	31580756	missense variant	C/T	snv	1.8E-02	2.1E-02	7
rs17817449	FTO	0.716	0.560	16	53779455	intron variant	T/A;G	snv			3
rs3782886	BRAP	0.724	0.480	12	111672685	synonymous variant	T/C	snv	1.9E-02	5.9E-03	5
rs1421085	FTO	0.752	0.280	16	53767042	intron variant	T/C	snv		0.31	10
rs7103411	BDNF ; BDNF-AS	0.752	0.160	11	27678578	intron variant	C/T	snv		0.82	3
rs11066001	BRAP	0.763	0.360	12	111681367	intron variant	T/C	snv		5.8E-03	3
rs13107325	SLC39A8	0.776	0.520	4	102267552	missense variant	C/A;T	snv	4.0E-06; 4.5E-02		24
rs1800973	LYZ	0.827	0.320	12	69350234	missense variant	C/A	snv	4.2E-02	4.3E-02	5
rs10514299	TMEM161B-AS1	0.827	0.120	5	88367793	intron variant	C/T	snv		0.21	1
rs1039002	PDE10A	0.851	0.080	6	165741969	intron variant	G/A;T	snv			1
rs10392	PPP1R16B	0.882	0.160	20	38922292	3 prime UTR variant	G/A	snv		0.17	6
rs139438618	SEMA3A	0.882	0.080	7	84008281	intron variant	A/G	snv		5.2E-02	4
rs2066702	ADH1B	0.882	0.080	4	99307860	missense variant	G/A	snv	1.5E-02	5.9E-02	3
rs12912251	LINC02694	0.882	0.080	15	38694167	intron variant	G/T	snv		0.25	2
rs12898460	LINC02694	0.882	0.080	15	38694612	intron variant	C/T	snv		0.23	1
rs6943555	AUTS2	0.882	0.080	7	70341037	intron variant	T/A	snv		0.34	1