DisGeNET - a database of gene-disease associations

List of associated variants

Alcoholic Intoxication, Chronic, C0001973

Source: CURATED ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	34
rs671	ALDH2	0.529	0.840	12	111803962	missense variant	G/A	snv	1.9E-02	5.8E-03	29
rs6265	BDNF ; BDNF-AS	0.436	0.760	11	27658369	missense variant	C/T	snv	0.19	0.15	8
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv		0.41	25
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	13
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	64
rs1229984	ADH1B	0.570	0.560	4	99318162	missense variant	T/C;G	snv	0.90		27
rs8050136	FTO	0.716	0.560	16	53782363	intron variant	C/A	snv		0.40	16
rs17817449	FTO	0.716	0.560	16	53779455	intron variant	T/A;G	snv			7
rs13107325	SLC39A8	0.776	0.520	4	102267552	missense variant	C/A;T	snv	4.0E-06; 4.5E-02		30
rs3782886	BRAP	0.724	0.480	12	111672685	synonymous variant	T/C	snv	1.9E-02	5.9E-03	11
rs29230	GABBR1	0.807	0.440	6	29608616	missense variant	A/C;G	snv	4.1E-06; 0.18		1
rs11558538	LOC107985948 ; HNMT	0.695	0.400	2	138002079	missense variant	C/T	snv	1.0E-01	8.4E-02	1
rs11066001	BRAP	0.763	0.360	12	111681367	intron variant	T/C	snv		5.8E-03	5
rs16969968	CHRNA5	0.653	0.360	15	78590583	missense variant	G/A	snv	0.26	0.24	4
rs9282858	SRD5A2	0.716	0.320	2	31580756	missense variant	C/T	snv	1.8E-02	2.1E-02	7
rs1800973	LYZ	0.827	0.320	12	69350234	missense variant	C/A	snv	4.2E-02	4.3E-02	6
rs137852569	AR	0.752	0.320	X	67686030	missense variant	G/A	snv		9.4E-06	3
rs1421085	FTO	0.752	0.280	16	53767042	intron variant	T/C	snv		0.31	16
rs2239803	HLA-DRA	0.882	0.240	6	32444056	intron variant	C/A;T	snv		0.50	3
rs578776	CHRNA3	0.742	0.240	15	78596058	3 prime UTR variant	G/A	snv		0.39	3
rs6356	TH	0.827	0.240	11	2169721	missense variant	C/T	snv	0.43	0.32	1
rs10392	PPP1R16B	0.882	0.160	20	38922292	3 prime UTR variant	G/A	snv		0.17	6
rs1789924	ADH1C	0.925	0.160	4	99353129	upstream gene variant	C/G;T	snv			4
rs1614972	ADH1B ; ADH1C	0.925	0.160	4	99336998	intron variant	C/T	snv		0.38	3